Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1278 |
Symbol | |
ID | 5161515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1428533 |
End bp | 1430338 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640553192 |
Product | GTP-binding protein LepA |
Protein accession | YP_001234408 |
Protein GI | 148260281 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0142175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTCGA CCCCCACCGA ACTGATCCGC AACTTCTCGA TCATCGCCCA TATCGACCAC GGCAAGTCGA CCCTGGCCGA CCGGCTGATC CAGACCACCG GCGCGCTCTC CGCCCGCGAG ATGACCGAGC AGGTGCTCGA CAACATGGAC ATCGAGAAGG AGCGCGGGAT CACCATCAAG GCGCAGACCG TGCGCCTCAA CTACAAGGCG AAGGACGGCA AGACCTACGT CCTGAACCTG ATGGACACGC CCGGCCATGT CGACTTCGCC TATGAGGTGA GCCGCTCGCT CGCCGCCTGC GAGGGCTCGC TGCTGGTGGT CGACGCCTCG CAGGGCGTGG AGGCGCAGAC GCTGGCGAAT GTGTACCAGG CGATCGACGC CAATCACGAG ATCGTCCCCG TGCTCAACAA GATCGACCTG CCGGCCGCCG AACCCGAGCG GGTGAAGCAG CAGATCGAGG ACGTGATCGG GCTCGATGCG TCGGACGCGG TGGAAATCTC CGCCAAGACC GGCCTCAACA TCGAGGCGGT GCTGGAAGCG CTCGTCACCC GCCTGCCGCC GCCGAAGGGC GACGAGACGG CGCCGCTCAA GGCCATGCTG GTCGACAGCT GGTATGACTC CTATCTCGGC GTGATCATTC TCGTGCGCGT GCGCGACGGG CGGCTGCGCA AGGGCCAGCG CGTCCGCATG ATGTCGACCG GCGCGGTCCA CACCATCGAC CAGGTCGGCA CCTTCTCGCC CAAGCTCACC CCGCAGGCCG ATCTCGGCCC CGGCGAGATC GGCTACATCA CCGCCGCCAT CAAGACGGTG GCCGACTGCA ACGTGGGCGA CACGATCACC GACGACCGCG CCCCCGCCAC CGAACCCCTG CCCGGCTTCA AGCCGTCGAT CCCGGTGGTC TGGTGCGGGC TCTACCCGGT CGATGCCGAC GATTTCGAGA AGCTGCGCGA CAGCCTCGCC AAGCTGCGGC TCAATGATGC GAGCTTCCAT TACGAGGCCG AGACCTCGGC GGCGCTCGGC TTCGGCTTCC GCTGCGGCTT TCTCGGTCTG CTGCATCTCG AGATCATCCA GGAGCGTCTG TCGCGCGAAT TCGATCTCGA CCTGATCGCG ACCGCGCCCT CGGTGGTCTA CCGGCTCTAC AAGACCAGCG GCGAGATGAT GGAGCTGCAC AACCCGGCGG ACATGCCGGA CGGCTCGGTC ATCGACCATA TCGAGGAGCC CTGGATCCGC GCGACCATCA TGGTGCCGGA CGACTATCTC GGCGCCGTCC TCACCCTCTG CAACGAGCGC CGCGGCCAGC AGGTCGACCT CACCTATGTC GGCAACCGCG CCATGGCGGT CTACCGGCTG CCGCTCAACG AGGTGGTGTT CGACTTCTAT GACCGGCTGA AATCGGTCAG CCGCGGCTAT GCCAGCTTCG ACTACCAGAT GGACGACTAT GTCGAGGGCG ACCTCGTGAA GATCTCCATC CTGGTCAACC AGGAGCCGGT GGACGCGCTG GCCTTCATCG CCCATCGCTC CGTCGCCGAC ACCCGCGGCC GCGCGATCTG CGCCAAGCTG AAGGACCTGA TCCCCCGGCA GCTCTTCAAG ATCGCCATCC AGGCGGCGAT CGGCGGCCGG GTGATCGCCC GCGAAACCCT CGGCGCGCTG TCGAAGGACG TCACCGCCAA GTGCTATGGC GGCGACATCA GCCGCAAGCG CAAGCTGCTG GAGAAGCAGA AGGAGGGCAA GAAGCGGATG CGCCAGTTCG GCAAGGTCGA AATCCCGCAG ACCGCCTTCC TCGCGGCGCT GAAGATGGAC GCCTGA
|
Protein sequence | MTSTPTELIR NFSIIAHIDH GKSTLADRLI QTTGALSARE MTEQVLDNMD IEKERGITIK AQTVRLNYKA KDGKTYVLNL MDTPGHVDFA YEVSRSLAAC EGSLLVVDAS QGVEAQTLAN VYQAIDANHE IVPVLNKIDL PAAEPERVKQ QIEDVIGLDA SDAVEISAKT GLNIEAVLEA LVTRLPPPKG DETAPLKAML VDSWYDSYLG VIILVRVRDG RLRKGQRVRM MSTGAVHTID QVGTFSPKLT PQADLGPGEI GYITAAIKTV ADCNVGDTIT DDRAPATEPL PGFKPSIPVV WCGLYPVDAD DFEKLRDSLA KLRLNDASFH YEAETSAALG FGFRCGFLGL LHLEIIQERL SREFDLDLIA TAPSVVYRLY KTSGEMMELH NPADMPDGSV IDHIEEPWIR ATIMVPDDYL GAVLTLCNER RGQQVDLTYV GNRAMAVYRL PLNEVVFDFY DRLKSVSRGY ASFDYQMDDY VEGDLVKISI LVNQEPVDAL AFIAHRSVAD TRGRAICAKL KDLIPRQLFK IAIQAAIGGR VIARETLGAL SKDVTAKCYG GDISRKRKLL EKQKEGKKRM RQFGKVEIPQ TAFLAALKMD A
|
| |