| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1270 |
|---|
| Symbol | |
|---|
| ID | 5161726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1416984 |
|---|
| End bp | 1418045 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640553184 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_001234400 |
|---|
| Protein GI | 148260273 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG GCATACTCAA CGGCGACGAT ATCGGGCATG AAATCGTGCC GGAGGCTGTC
AGGGTCATGC AGGCCGCCGC AGCCCGGACC GGGCTCGCGA TCGAGTGGCA GGATATCCCG
ATCGGCCGGG CGGCGCTTGA CAGCCTGGGT TCTACCCTGC CGGACGGAAC CATCGAGCGG
CTCGACGCCC TGGATGGGTG GCTGCTTGGC CCGATCGGGC ACATGGCCTA TCCGAAGATA
CCTGAGGCGA TCAACCCGCA TCCGCTGCTG CGCAAGCATT TCGACCTGTT CGCGAATATC
AGGCCGGTGA AGTCCCATGC CGCGCTGCCC TGCCTGCATC AGGGCGTCGA TCTCGTCATC
GTCAGGGAAA ATAACGAGGG CTTCCAGCCG GACCGCAACG TCGTCGCCGG CTCGGGCGAG
TTTCGGCCAA CGCCGGACGT GACGATCTCC GTGCGGGTCA TCACCCGGAA CGGGTCATCG
AAAGTCGCGC GGGCGGCATT CGAACTGGCA CGGGCGCGCC GCCGGCATCT GACCGCGGTG
CACAAGGACA CCGTGTTCAA GCTCGGTTGC GGCATGTTCG CCGAGGAATG TCGAAGGCTG
GCGGCGGAAT ATCCCGATGT GACCTATGAC GAGGCAATCG TCGACACGTT TGCGATGCGC
CTGGTGATGA CCCCGCAGCG CTACGACGTC GTCGTGACCA CAAACATGTT CGGCGACATC
CTGACCGACG AGGCCGCCGG CCTGGTCGGC GGTCTCGGGA TGGCGGCAGG ACTGTGCGCC
GGGCCGCGCC ATGCGATGGC GCAGGCGACA CACGGTTCCG CACCTGACAT CGCAGGGCGC
GGGATCGCCA ATCCCTATGC AATGATCATG TCAGGCCAGA TGCTGCTCGA CTGGCTCGGC
CGCCGCCATG CCGAACCCGC GGCAACCGCC GCGGCGCGCC TGATCGAGCA GGCCGTGGCA
AACATGATCG AGGAGCGCCG CGCGCTGACC CCCGATCTGG GAGGTCAGGG GACGACCGCA
GGCATGGGCT CGGCGATTAT CGAGGCGATG ACCGAGAGTT GA
|
|---|
| Protein sequence | MKIGILNGDD IGHEIVPEAV RVMQAAAART GLAIEWQDIP IGRAALDSLG STLPDGTIER
LDALDGWLLG PIGHMAYPKI PEAINPHPLL RKHFDLFANI RPVKSHAALP CLHQGVDLVI
VRENNEGFQP DRNVVAGSGE FRPTPDVTIS VRVITRNGSS KVARAAFELA RARRRHLTAV
HKDTVFKLGC GMFAEECRRL AAEYPDVTYD EAIVDTFAMR LVMTPQRYDV VVTTNMFGDI
LTDEAAGLVG GLGMAAGLCA GPRHAMAQAT HGSAPDIAGR GIANPYAMIM SGQMLLDWLG
RRHAEPAATA AARLIEQAVA NMIEERRALT PDLGGQGTTA GMGSAIIEAM TES
|
|---|
| |