Gene Acry_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1217 
Symbol 
ID5159916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp1353402 
End bp1354307 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID640553131 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001234347 
Protein GI148260220 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0352302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCCC GCCCGATCCT GATCACCGGG GCGAGCGGCC AGCTCGGCCA CGCCCTCGCC 
GCCCGCGCGC CCGCCGCCGG GCTCCCCGCC CGCGCCATCG GCCGCCCCGG CTTCGACTTC 
GACGCCCCGG AAACGATCGC CAGGGCCCTC GCCGCCGCCG ATCCCGCCCT CGTCGTCAAC 
GCCGCCGCCT GGACCGCCGT CGACGCCGCC GAGACCAGCG CCGACGCCGC CTTCCGCGCC 
AACCGCGACG GCCCCGCAAC CCTCGCCACC CTCTGCCGCG CCCGCGGCAT CCCCCTCATC 
CACGTCTCGA CCGACTATGT CTTCGACGGC ACCAAGGGCG CGCCCTACAC CGAAACCGAC 
CCGATCGCCC CGCTCGGCGT CTACGGCCAC AGCAAGGCCG CCGGCGAGGA AGCCATCCTC 
GCCGCCGGCG CCGACGCCAT CATCCTCCGC ACCGCCTGGG TCTTCTCCGC CACCGGCAAG 
AACTTCGCCC GCACCATGAT CGCCGCCGCC CGCCGCCTGC CGGCGCTGCG CGTCGTCGCC 
GACCAGCGCG GCACCCCCAC CGCCGCCGAA GACCTCGCCG ACGCCATCCT CGCCATCGCC 
GCTCGCATCC TCGCCGAAGG CTGGCAGCCC GGCTTCGCCG GCATCTTCCA CGCCACCAGC 
GCCGGCGACA CCTCATGGCA CGGCTTCGCC ACCGAAATCC TCGCCCTCGC CGCTCGCCAC 
GGCACACCAC ACCCCGACAT CATCCCCATC GCCACCGCAG ACTGGCCCAC CCCAGCCCGC 
CGACCCGCCG ACTCCCGCCT CGACACCACA AAACTCAGCC AAACCTTCGC CCTCGCCCTC 
CCACACTGGA AAGACGCCAC CGCCCGCATC GTCCCCGCAA TCCTCGCGCA GGACGAAACA 
CCGTGA
 
Protein sequence
MPPRPILITG ASGQLGHALA ARAPAAGLPA RAIGRPGFDF DAPETIARAL AAADPALVVN 
AAAWTAVDAA ETSADAAFRA NRDGPATLAT LCRARGIPLI HVSTDYVFDG TKGAPYTETD 
PIAPLGVYGH SKAAGEEAIL AAGADAIILR TAWVFSATGK NFARTMIAAA RRLPALRVVA 
DQRGTPTAAE DLADAILAIA ARILAEGWQP GFAGIFHATS AGDTSWHGFA TEILALAARH 
GTPHPDIIPI ATADWPTPAR RPADSRLDTT KLSQTFALAL PHWKDATARI VPAILAQDET 
P