Gene Acry_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1200 
Symbol 
ID5162493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp1336217 
End bp1337146 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content70% 
IMG OID640553115 
Producthistone deacetylase superfamily protein 
Protein accessionYP_001234331 
Protein GI148260204 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTTG CCCTGATCAC CCATCCCGCC TGCTTCGACC ACGATACCGG CCCGCACCAC 
CCCGAGCGCC CGGCGCGGCT GCGGGCCGTG CTGGGCGCGC TGGAAACGCC CGAATTCCAG 
CATCTGCTGC GCGAGGTGGC GCCGGAGGCG CCTGAATCCG CGCTGCGCGC GGTGCATCAC 
GACGCTTATG TCGATTCGAT CCTGGCGATG GCGCCGGCGG AAGGCGAACC GGTGCATCTC 
GATGCCGACA CGCTGATGAG CCATGGCAGC CTCGCCGCGG CGCTGCGCTC GGCCGGCGGC 
GCCATGCGCG CGGTCGACGC GGTGATGGAG GGCTGGGCCC GCGCCGCCTT CGTTGCCACG 
CGGCCGCCGG GGCATCACGC CGAGCCGAAT CGTGCCATGG GCTTCTGCCT GTTCGCCAAT 
GCCGCGATCG CCGCGCATCA TGCCCGCGCC CATGGTCTGA AGCGCGTTGC CGTGGTCGAT 
TTCGATGTCC ATCACGGCAA CGGCACCCAG GCGATGTTCG AGACGGATGC CGACCTGTTC 
TATGCCTCCT CGCACCAGTA TCCGTGCTAT CCGGGCACCG GCCGCCCTTC CGAGCGCGGG 
GTTGCCGGCA ATATCGTCAA CGCCGCGCTG CCGCCCGGCT CGGGCTCGGC CGAGTTCCGC 
ACCGCTTGGC AGGACACGCT GATCCCCGCA CTCGAGCGGT TCGCGCCGGA ACTGCTCATC 
ATCTCCGCCG GGTTCGATGC CCACCGGTTC GATCCGCTCG CCGAACTCAA TGTCGAAACC 
GCCGATTTCG CCTGGCTGAC CGAGGCGCTT GTGCGCGTCG CCGACCGGCA TTGCGGCGGC 
AAGGTGGTTT CCCTGCTCGA GGGCGGCTAC GATCTCGAGG CGCTCGCCGC TGGCACCGCC 
GCCCATGTCC GCGCCTTGAT GCGGCATTGA
 
Protein sequence
MPVALITHPA CFDHDTGPHH PERPARLRAV LGALETPEFQ HLLREVAPEA PESALRAVHH 
DAYVDSILAM APAEGEPVHL DADTLMSHGS LAAALRSAGG AMRAVDAVME GWARAAFVAT 
RPPGHHAEPN RAMGFCLFAN AAIAAHHARA HGLKRVAVVD FDVHHGNGTQ AMFETDADLF 
YASSHQYPCY PGTGRPSERG VAGNIVNAAL PPGSGSAEFR TAWQDTLIPA LERFAPELLI 
ISAGFDAHRF DPLAELNVET ADFAWLTEAL VRVADRHCGG KVVSLLEGGY DLEALAAGTA 
AHVRALMRH