Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1191 |
Symbol | xerC |
ID | 5162568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1326608 |
End bp | 1327549 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640553106 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_001234322 |
Protein GI | 148260195 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.60628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGGCT CGCGACCAAG CGGCCCGGCG GCTGACGCCC AGGCGCTGCG GGTCGAATTT CTCGACTTTC TCGTCGGGGA GCGGCGGGCC GCGGCGCTGA CGGTATCGAC CTATGGTGCC GATCTCGCGG AATTTCTCGG CTTCGTCACC CGGCATATCG GCGCCGAGCC AACCGGCGCC GATCTCGCGG CGCTGAGTCT CGCCGATTTC CGGGCCTGGC TGGCGAAGGC GGCGAGCGAT GGCGTCGGCA ACGCAACACG GGCGAAGAAA CTTTCCGCGG TACGCAGCTT TTTCCGCTGG CTGCGGCAGC GTCACGGCAT GATCAACGAG GCGCCGGGGC TGCTGCGCAC GCCAAAATCG CGCCGCCCCC TCCCCCGCGC GCTGACCGCG CCGGACGCCG CCGCCGTGGT GGACAGCCTG GGCGACGATG CGGCGAGCCC GGCGCTCGCG GCGCGCGACA CCGCGCTGAT GGCGCTGCTC TACGGCGCCG GGCTGCGGAT ACACGAGGCG CTCGGGCTCA ATATCGGCGA TCTGCCGCCG GAGGGCGCGC CGCTTTCGGT GCGCGGCAAG GGCGGGCGGC AACGGATCGT GCCGCTGCTG CCGGTGCTGC GACGGGAGAT CGCTTCCTGG CTGCGGCACC ACCCCGCCCC CACGCCGGAC GCGCCGCTCT TTCTCGGTGC GCGCGGGGCG CGGCTCAATC CCGGCGTGGT CCAGCGGCGG CTGCGGGATT TCCGCCGGCT CAACGGCCTT CCCGAACACG CCACGCCGCA CGCGCTCCGG CATTCCTTCG CGACACATCT GCTGGCCAAT GGCGCCGACC TCAGGGCGAT CCAGGAACTG CTCGGCCACG CCAGCCTCTC CACCACGCAG CGCTATACAG CGGTGGATGC CGACCGGTTG ATGGCGGTCT GGCAGGCGGC GCATCCGCGA GCGAAGACCT GA
|
Protein sequence | MSGSRPSGPA ADAQALRVEF LDFLVGERRA AALTVSTYGA DLAEFLGFVT RHIGAEPTGA DLAALSLADF RAWLAKAASD GVGNATRAKK LSAVRSFFRW LRQRHGMINE APGLLRTPKS RRPLPRALTA PDAAAVVDSL GDDAASPALA ARDTALMALL YGAGLRIHEA LGLNIGDLPP EGAPLSVRGK GGRQRIVPLL PVLRREIASW LRHHPAPTPD APLFLGARGA RLNPGVVQRR LRDFRRLNGL PEHATPHALR HSFATHLLAN GADLRAIQEL LGHASLSTTQ RYTAVDADRL MAVWQAAHPR AKT
|
| |