Gene Acry_1189 details

Gene Information

• Locus tag: Acry_1189
• ID: 5161062
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1325554
• End bp: 1326225
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640553104
• Product: MotA/TolQ/ExbB proton channel
• Protein accession: YP_001234320
• Protein GI: 148260193
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0811] Biopolymer transport proteins

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.503443
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAA TCGTCCGCCT CGTCATGATG ACGGGTGGTC TGCTGGCGGT GATGCCGGTT 
CTGCTGCTGG TGACACTCGT CGTCGGGCTC GAACGGTTCT GGCTGCTCAA GCGCACGCTC 
GGCGCCGGGC GGCGCATCCA TGCCGCGCTG CGCGCCGTGG GTTATGGCAA TCCGGCCGGG 
CTGCGCCAGC TCGCCGAGAC GAACGGCGCC ACGCTGCAGG GCCACCTGAT CGCAACCGCG 
CTGGCCTCGC GCGGGGAAAA CGCCGACGAA CTCGACAATC ACCTCGAGGA AGAGATCATG 
GACGCCATGC CGCGGATCAC CCGGGGCCTG TGGATTCTCG ATACCGCGGT GACGATCGCG 
CCGTTGCTCG GGCTGTTCGG CACGATCATC GGCATGATCC AGGCCTTCGA CGTGCTGTCG 
AGCAACGGAG GGCCGGCGAA GGTGACAGGC GGGATCGCCG ATGCGCTGGT CTCGACCGGC 
GCGGGCCTGC TGATCGCGAT CATCGCCGTC TATCTGGTCA ATTATTTCAA CAATCTCAGC 
CGCCGGATCG TCCTGCAGCT CGAACTCATC AAGGTGGTGC TGATCAACCG TCTGCACGGG 
CGCGGGCTGG CCGGCGACGA CGCGGTGGAG GATCCGCCCA AGCGGCGCGC TGCCAGCATG 
GCCAGGGTCT GA 

 

Protein sequence

MNEIVRLVMM TGGLLAVMPV LLLVTLVVGL ERFWLLKRTL GAGRRIHAAL RAVGYGNPAG 
LRQLAETNGA TLQGHLIATA LASRGENADE LDNHLEEEIM DAMPRITRGL WILDTAVTIA 
PLLGLFGTII GMIQAFDVLS SNGGPAKVTG GIADALVSTG AGLLIAIIAV YLVNYFNNLS 
RRIVLQLELI KVVLINRLHG RGLAGDDAVE DPPKRRAASM ARV