| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1152 |
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| Symbol | |
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| ID | 5162451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 1283213 |
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| End bp | 1283563 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640553066 |
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| Product | transthyretin |
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| Protein accession | YP_001234283 |
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| Protein GI | 148260156 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.242514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACC TGACCACGCA TGTTCTCGAC ACTGCCCACG GCATTCCGGC GGCCGGTGTG
CGTATCCGCC TGTTCGCTGC CGGAGCGGCC GGAGGGCCCC TGGCCGAAGC CGAGACGGAT
GCTAACGGCC GCGCGAAGAT TGTGCCCGCG AACGGCGTGG CCTTCGATTC CGGCAGCTAT
GACCTCGTGT TTTCCGTCGG CGCCTATTTC GGCGCGAAGG GCGCGGCCGA GCCGGCACCG
CGCTTTCTGG ACGATGTCGT GATCCGCTTC GGTCTCCGCG CCGGGGCCGC GCACCTTCAT
GTCCCGCTGC TGATCTCGCC GTTCGGCTAC ACGACCTATC GGGGACAATG A
|
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| Protein sequence | MTDLTTHVLD TAHGIPAAGV RIRLFAAGAA GGPLAEAETD ANGRAKIVPA NGVAFDSGSY
DLVFSVGAYF GAKGAAEPAP RFLDDVVIRF GLRAGAAHLH VPLLISPFGY TTYRGQ
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