Gene Acry_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1142 
Symbol 
ID5162292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp1272301 
End bp1273350 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID640553056 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_001234273 
Protein GI148260146 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.127468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCATTC CGCGTATTGC CGTCACGATG GGGGATCCGG CCGGTGTCGG CCCGGAAATC 
ATCGCGAAGG CTGCCCTGCG CCTGAAGGAC CGGATCGAGG CCGGCGAGCT CGCGCTGGTG 
GTGACGGGGT CCGGCCACCG CCTCGCCGCC GCTTGCGCCG GGTTGGGCAT TGCCCAGCCT 
TTCGCTGCCG TTTCCGCCGA TACCCCGCGC GAGGCGCTGC CGCCTTGTGC GCTGGTCGAG 
GTCGGGCCCG ACGCCTCTGC CATCGAGCCG GGCAAGGTTT CGGCCGTCGC GGGCGAAAGC 
GCCTATCAGG CGATCGCCGC CGGCGTGCGC ATGGCGATGG GCGGCCTGGT CGATGCGATC 
TGCACGGCGC CGATCAACAA GGAGGCGCTC AATCTCGCCG GCCATCATTA CAGCGGCCAT 
ACCGAGCTGC TTGCCGATCT CACCGCCGCG CGGAATTCGG TGATGATGCT GGCCCATGGC 
AACATGCGCG TGAGCCATGT CTGCACCCAT GTCGCGCTGC GCGACGTGCC GAAGCGCCTC 
ACGCCCGAGC GGCTGCGTCA GGTGGTGGAA CTGACAGCGG ACGCGCTGAA CCGGCTGGGC 
ATCGCCCGCC CGCGGATCGG CATCGCCGCG CTCAATCCGC ATGCCGGCGA GAACGGCCTG 
TTCGGCCGCG AGGATATCGA CATCACCGCC CCCACCGTCG AGGATCTGCG TCGCGCCGGC 
CACGACGTGA CCGGTCCGGT TCCGGGCGAC ACGATCTTCG TGAAACTGCG GGCCGGCCAG 
TTCGACGCGG TCGTCGCGAT GTATCACGAT CAGGGCCATA TTCCGGTGAA GCTGCTGGGC 
TTTTCGGTCG ATCCCACGAC CGGCGAATGG CAGGCGCTCA GCGGCGTCAA CGTCACGCTC 
GGCCTGCCGA TCATCCGCAC GTCGGTCGAC CACGGCACGG CGTTCGACAT TGCCGGCAAG 
GGCATCGCCA GCGAGCAGAG CCTGCTGGAA GCCATCGACT ACGCGGTGCA ACTCGCGCAA 
GGATCGGACC GGACCGCGCC CTCACCGTAA
 
Protein sequence
MAIPRIAVTM GDPAGVGPEI IAKAALRLKD RIEAGELALV VTGSGHRLAA ACAGLGIAQP 
FAAVSADTPR EALPPCALVE VGPDASAIEP GKVSAVAGES AYQAIAAGVR MAMGGLVDAI 
CTAPINKEAL NLAGHHYSGH TELLADLTAA RNSVMMLAHG NMRVSHVCTH VALRDVPKRL 
TPERLRQVVE LTADALNRLG IARPRIGIAA LNPHAGENGL FGREDIDITA PTVEDLRRAG 
HDVTGPVPGD TIFVKLRAGQ FDAVVAMYHD QGHIPVKLLG FSVDPTTGEW QALSGVNVTL 
GLPIIRTSVD HGTAFDIAGK GIASEQSLLE AIDYAVQLAQ GSDRTAPSP