Gene Acry_1102 details

Gene Information

• Locus tag: Acry_1102
• ID: 5160352
• Is gene spliced: No
• Is pseudo gene: Yes
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1226606
• End bp: 1232993
• Gene Length: 6388 bp
• GC content: 67%
• IMG OID: 640725923
• COG category: [L] Replication, recombination and repair
• COG ID: [COG4644] Transposase and inactivated derivatives, TnpA family
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTCG CCGGCAACAG GCCCGACGAT TTCACCGACA TCGTCAATCT CGCGGTGGAG 
GAGAGCGGAA CGGGGATCTG GGATCGCGAC GTCGTGACCG GGGAGATCCG GTATTCGCGG 
GGCTGGTGGC GGATCCTGGG CTATGCCGAG ATGCCGGCCC GCTCGCATAT CGAGGCGGCC 
TATGCCCGCG TCCACCCGGA TGACCTCGAC TATGTCCGGC AGACGATGCA GGACCATTTC 
GACCGGAGGA CCGCGCGCTA TGAGGTCGAG CATCGGCTGC GCTGCGCCGA TGGATCGTAC 
AAATGGGTTC TCAGCCGGGG CATGGTGGTT GAGCGCGACA TCGCGGGCCG CCCGGTGCGC 
ATGGTCGGCA CGACGACCGA CATCACCACG CTGCGCACCC TTGCCGAGGA GCTGGCGCGG 
GAGAAGGCCG AGGCGCGTTT TCGCGCCGAG CAGCTCGCCG AGCGCACGCG CGAACAGGCC 
GCCGCCCACC GGCTCGCGCA GATCGGCAGC TGGCAATGGG ACCTTGCGGC CGGCGAGATC 
CGCTTCTCGC CCGAGACCTG GCAGCTCGCC GGCGGCGAGG CGCGGAACCG GCCGGTGACG 
CTCGACGAGT TGCGGGCGCT GTTTCCGCCG GCCGATCGCC GGCTGATGCT GCGGCGGTTT 
GTCGCCGGGC TGAAGGCGGG GCAGCCGGTG AGCGTGCAGC ACCGGCTCAC CGCGTTCGAC 
GGACGGACGC TGGACGTCGT GTCGTACGCG GAGCCGATCG GCGAGGCGGG CGGCAGGGCG 
AGGCGGCTCA GGGGCGTGAC CCAGGACGTG ACGGCGTACC GGCGGATGCA GGCCGCGCTG 
CGGTCGTCGG AGGCGCTGGC CTTTCGCGTG CTGGAGGCGA CGCGGGATGC GGTGATCGTG 
TTCGATCGTG GCGGCCGCGC CCGGTTCGCC AACGCGCGGG CGGCGCGGTT CGCAGGCGCC 
GGGCAGGAGA TCGTCGGCAA CCGGCTCGCC GACCTGTTCC CCGGCACCGC GGGCCACCGG 
CTGGCGGCCG GCGCGGAGCG CGCGGCCGCG ACCGGCGCGC CGGTGCGGCT CGAACTGTCA 
TGGGCGCCGA CCGGGCGCTG GCTGGAGGCC GATCTCTATC CGGGCGAGGA TGACATCTCG 
CTGTTCGTCC GCGATGTCAC CGAGCGGAAG CTGACGCAGG ACCGGCTGAT CGAGGCGGCG 
GAAACCGACT CGCTCACCGG GGAGTTCAAC CGAAGGGGAT TCTTCACCCG GCTCGAGGCG 
GCGCTGACCG CGCAGGCCAG GGGCCGCGCG ATGGCGCTGA TCTGCGCCGA CGTGAACTAC 
TTCACCGAGA TCAACGATTC ATTCGGCCAC GGCGTGGGCG ACGAGGTGCT GAAGACCGTC 
GCCCGCCGGC TGAAATCGTG CCTGCGGCCG CGGGACATCC TGGCGCGGAC CGGCGGCGAC 
GAATTCATGA TCCTGCTGAA CGGCATGCGC CGGCCGGGGG ATGCGACGAC GCTGGCGCGG 
CGGATCGTCG GCGCGATGGA GGAGCGGTTC GAGCTGGGCG ACCTGTCGCT GCGGATCAGC 
CTGTCGATCG GCCTCGCGAT CGCCTCGCTC GCGGATCGGG ACGCGGCGCG GCTGTGCCGG 
CATGCCGATC TCGCGCTGTA CGAGACGCGG ACGGAGGCGC CGGGGAGTTT CCGGGTGTTC 
ACGCCGGCGA TGGAACAGGA GAGCCTGCGC AAGCGGCAGC TCAAGCGCGA CCTCGCGGAC 
GCGCTCGGGC GCAGCGAGCT CGAACTGGCG TTCCAGCCGA TCGTCCGCAC CGCGGATGGC 
ACGATCGCCG CCGCGGAAAC GCTGCTGCGC TGGAACCATC CGGAGCAGGG CCGCATTCCG 
CCGGCGGAGT TCATCCCGCT CGCCGAGGAG TCCGGCCTGA TCGCGCCGAT CGGCGCCTGG 
GTGCTGCGGC AGGCCTGCGC CGCCGCGTGC CGGTGGCCGG AAGCCGTCGG CCTTTCCGTC 
AATGTCTCGC CGCGGCAGAT CGAACTGGCC GATCTGCCGG CGCTGGTGCG CGATGTGCTG 
GAGGCGACCG GGCTCGCCCC GCGCCGGCTT CATCTCGAGA TCACCGAAAC CGTTCTCGTC 
TCGCGCAACC GCCATTACCT GGCGACGCTG CACCGGCTGC GGGAGCTGGG CGTGCGGCTC 
GTGCTCGACG ATTTCGGCAC CGGCTATTCG GCCTGAAGTA ACGAAACGCC CTAGGCTGTA 
GCATAAGCGG ACAAAGTGGG AACGTTGACT GGTTGGGATC GAGGTTTTCT GTGGGTTTGA 
GCGGAGAGCG CGGTTCTGAG GCCGGGATCG CGCGATGACG GAAAACACAT GTTTTCCGTC 
GGTGGTCCGA GACCCGCCGA AAAATCCCGG ATTTCCTGCC GAATCATGTA CGGAAAACAC 
CGTCGGAATG GTATGGTATA CGGAAACCGT CTCGAAGGGG ATTTCCGTAC ATGCTGATCG 
GCTACATGCG CGTCTCGACC GACAATGACC GACAGGTGCT CGACCTGCAA CGCGATGCCC 
TGCTCGGTGC CGGGGTCGAT GAGCGGCATC TGTTCGAGGA TCGTGCCGGG GGCAGCCGGC 
GCGATCGGCC GGGTCTCGCT GCGGCACTGG CCTATCTGAA ATCCGGCGAT TGCCTTGTGG 
TCTGGAAGCT GGACCGGCTC GGCCGGTCGC TGCCGCATCT TCTGGAGACG GTGAACAGCC 
TCAGGGCTCG TGGCGTTGGC TTCCGGTCGC TGACCGAGCA GATGGACACC ACGACGCCGC 
AGGGGGAATT CCTGTTTCAT GTTTTTGGCG CTCTGGCGCA GTTCGAGCGT TCGCTGATCC 
AGGAGCGTGT GCAGGCAGGT CTGGCGGCCG CCCGTCGGCG CGGCAGGCGT GGTGGCCGAC 
CGGTGGCGAT CGATGCCGAG AAGCTGGCGG CGGTGATCGC GGCGCTGGAC GCTGGTGCCA 
CGAAAGCGTC GGTCTGCCGC ACTTTCGGCA TTTCGCGGAG TACGCTGGTC GACTCTCTGG 
CACGGATCGG CTGGTCTCCT ATCCTCAACA GGCAGGAGGG AGGGACCAGT GGGTCATCGA 
CGGATATTGA CCGGGGAACA GATCGCACAG CTGTTCGACC CGCCGACTGA TCGACGCGGC 
ATAATTCGTC ACTACACGCT GTCTGTTACT GATCTTGCAA TGATCCGGCG CGGTCGGGGC 
GATCACCATC GTCTCGGTCT GGCTCTCATG CTCTGTTACC TGCGGTATCC CGGCCGGCCG 
CTCCATGCCG GCGAGATACC CGATCCTGCC CTGGTCTCGT TCGTCGCCAC ACAGATCGAC 
GTCTTGCCGG ATTCCCTCGG TGCTTATCTG AGGGTGGATC AAAATCGACG CCGGCATTCA 
GCGGCTTTGC AGGATCGCCT CGGGTTGCGG CCATGGGGGC CGCGCGTGGC GGCAGACCTT 
GCCGACTGGC TGCTGGCGCA TGCACTGGAA ACCGACCGGC TGGTCGATCT GGCGGCTTTG 
GTGCTGGAAG AGTGCCGCGG TCGCGGGGTT CTTCTACCTC GCCCGGCGCA GCTCGAGCGG 
CTCTGCATCG AGGTTCGATA CCGCGCGCGC CGGGAAATCG AGCGTCTGCT GACCGAGGGT 
CTGTCCGCCG ATCAGCGGCG TCGGCTGGAT GCGTTGACGG AGCGGCGTCT GGACACCAGC 
CAGAGCTGGC TGGCCTGGCT GCGCCAGATC CCGGAATCGG CAAAGCCGGC ATCCATGCTC 
GGGGTGATCG AGCGGTTGGA GCACATCCGG GCAATCGGCA TTGATCCGGC GCGCGGTCGC 
CGGATCAATC AATCCCGGCT CGCCCAGCTC GTTCGCGAGG CCGGCCGGAC CACGGTGCAG 
CATGTTGCTG GCTACGAGCG CCGGCGCCGG CATGCCGTGC TCACCGCGAT CGATCTCGAT 
CTGTCGGCCC GCCTGACGGA TCAGGCGATC ACTCTGTTCG AACGGCTGAT CGGCGCGATG 
TTCCGCAAGG CGGAAGGCCG ACATGCCCGG GCGTTCCAGG CCGAAGGCCG GGCGATCAAC 
GAGAAGGTCC GGCTTTATGC GAGGATCGGC GCCGCCCTGA TGGCCGCGCG CGCCGGCCAG 
GGCGATCCCT TCGCGGCGAT TGACAAGGTG ATACCCTGGG ACCGGTTCTG CTCGACCGTT 
ATGGAAGCGG AAACTCTGGT TCGTTCGGAA GATTTCGATC CCTACGAGGT GCTGAGCGAA 
CATTATGCCG GCATTCGGCG CTGGGCGCCG GCGTTTCTGG CCACTTTCGA GTTTCAGGGT 
GTTCCCGCCG CGGCGTCGTT GATGCGCGCG ATCGCCATGC TGCGCGCCAT GAACAGCGCG 
GGAGCCTCGA CGCTGCCCAA GTCAGCGCCG ACCGCCTTTG TCCGGCCGCG CTGGGCGCGT 
CATGTCCTCA CGGCACACGG CATCGACCGG CGTTATTACG AACTCTGCGT CCTGGCGGAA 
TTGCGTCAGC GCCTTGCTGC CGGCGATGTC TGGGTTGCCG GCAGCCGGCA ATATCGGGCC 
TTCGAGGAGC GGCTGATCTC CAGGGAAACA TTTCAGGTCC TGCAAAAAGA GTCCAGCATT 
CCGGTCGCTG TCGAGACCGA CTTCGAGCGC TTCATCGCGA CCAGGCGGAC CTGGCTGGAT 
GCGCGGCTGG CCGAGATCGA CATCCGTGCC CGGGGCGGGC TGCTTCCCGA TGTGACGATC 
GAGAAGGGCG TGCTGAGAAT CACACCGATC GAAAAATCGA CTCCGCCCGA GGCCGAAGCG 
CTGGCAGCAA AGCTCTATGC CGCGCTGCCC CGCATCCGGA TCACTGACCT GCTGACGGAA 
GTGGCCGGCT GGACCGGCTT CCCGGATTGC TTCACCCATC TGCGCACCGG CGAAGCCGCC 
GCTGACCCCC GGGTTCTGAT GGCGGGGCTG CTGGCCGATG GCCTCAATCT CGGCCTGACC 
CGGATGGCCG AAGCTTGCAG CATCGCCAGT CTGGGCCAGC TCGCCTGGAC CGCTGACTGG 
CACATCCGCG ACGAGACCTA CGCCCTGGCG CTGCGCCGCC TGGTCGAACA CCAGAGCCGC 
GAGCCGCTCG CCGCTCTCTT CGGGTCGGGA ACCGCCTCAT CCTCGGACGG GCAGTTCTTC 
CGCGCCGGCG GTTCTGGCCG TGATGCGAGC CGGATCAATG CGCACTATGG CCCCGAACCG 
GGTCTGAAAT TCTACACCCA TCTCTCCGAT CGCTACGCGC CGTTCCATAC CAGGGTGATC 
GCCGCAACCG CCAGCGAAGC CCTGCATGTC CTCGACGGCC TGCTCGATCA TCACGGCGAT 
GCGCCGCCAC GTCAGCACCG GCACCATACC GATGGCGGCG GGGTGTCGGA TCATGTCTTT 
GCCCTGTGCG CCCTACTTGG ATACGTGTTT GCGCCGAGAA TTCCCGATCT GAAAGACCGG 
CGTCTCTACA GTTTTGCCAG ACCGGCAGCC TATCCGACGC TCGCGCCGAT GATCGCCGGC 
CGCATCAACG TCGATCTCAT CCGCACCCAT TGGCCCGATC TCCTGAAGAT CGCCACCTCG 
ATCCGCACCG GCACGGTGTC CGCGTCGGTG ATCCTGCGGC AACTCGCCGC CTACCCACGA 
CAGAACGCCG TCGCCGCGGC ACTGCGCGAA CTCGGCCGTC TCGAGCGGAC GCTGTTCACC 
CTCGACTGGC TGGAAGATCC GGGCCTGCGC CGTGAAAGCA GTCATGAACT CAACAAGGGC 
GAGGCCCGCA ACAGCCTGGC CCGCGCCGTC TTCATTCACC GGCTCGGCGA AATCCGTGAC 
CGGACCTTCG AGAACCAGAC ACATCGAGCA TCTGGCCTGA ACCTCCTGGT CACCGCTATC 
ATCCTCTGGA ACACACGCTA TCTCGCGCAA GCCATACAGG CCCTACGCCA GGTCGAGGAT 
GTGCCCGGAA CCCTCCTCAG GCATCTCTCG CCGATCGGCT GGGAGCATGT GAACCTGACC 
GGCGACTACA TCTGGAGCGC CAAACAGAAA TCGTCGGAAA ACCATGCCGG ATTGCGGCCG 
CTCCGGCCAA TCCACGACAC GACCACCCAC GCAGCCTGAT GTTCCCACTT TGTCCGCTTA 
TGCTACACCG CGGAGCGTTC CGTTACTTCG GGCCTATTCG TCCCTCGCCC AGCTCGATGC 
GTTCCGGTTC GACGCCATGA AGATCGACCA GTCCTTCCTC CGCCGGATCC GCGCGGAGAC 
GGACGAGACG CCGATCCTGA ACGCGATCGT CGGCATGGCC ACGGCCATCA GGATGCCGAT 
CACGGTGGAG GGCGTCGAAA CCCAGGTGCA GCTCAACCAT GTGCGCCGGC TCGGCGCGGC 
CTGCGTGCAG GGCTTCTATT TCGGCCAGCC CGTCAATGAG GTCGGCATGC AGGGGCTGCT 
CGCGCGGGGG TTGACGGCGA GCCGGTGA 

 

Protein sequence