| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1098 |
|---|
| Symbol | |
|---|
| ID | 5160249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1222977 |
|---|
| End bp | 1223987 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640553015 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_001234232 |
|---|
| Protein GI | 148260105 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.981697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATAC GCGCCACGCT GTCCCGCCTC GGGATCGACC CCTACCTGTT CTTCCTCCTC
GGCACCGTGG CGCTCGCCGC GCTGCTGCCC GCGCGCGGCC TCGCCGCCGT CGTGGTCGGG
CACGCGGTTC ACTGGGTCGT CGCCCTGCTG TTCTTCGTCT ACGGCGCCAA ACTCTCCACC
GCCGAGGTCC TGCGCGGCCT GCTGCACTGG CGGCTCCAGG GCGCGGTGTT CGCCTGCACC
TTCATCCTGT TTCCCGCCCT CGGCCTCGCC GCGGTCACCC TGCTCGGCTC CGCCCTGCCG
CCGGCGCTGG CCACCGGCAT CATCTTCGTT GCCATCCTGC CCTCCACGGT GCAGTCATCC
ATCGCCTTCA CCTCGATCTC CCGCGGCAAC GTGCCCGCCT CGCTGTGCAG CGCGTCGGTC
TCGAACCTCG CCGGCATGGT GATCACGCCG CTCCTGGTCA TGCTGCTGCT GCACGCGAAG
GGCGGGTTCA GCGCCGGCGC GCTGGAAGAC ATCGCGCTCC AGCTCCTCGC CCCCTTCGCG
GCCGGCCAGC TGCTCCGCCC CATCCTCGGC CCCGTCCTGC AACGCCACCG CCTGATCACC
ACCATCGTCG ATCGCGGCTC GATCCTCGTC GTGGTCTACG CCGCCTTCAG CGCCGGCATG
GTCGGCGGCA TCTGGTCGCG CGTCTCGCCG GAAAGCCTGG TCCTGGTCAT GCTGGTCGAT
GCGGCGCTGC TCGCGCTGGT GCTCACCGTC ACCAGCCTCG CCGGCGCCCT CGGCTTCTCG
CGCGAGGACC GGATCACCCT CATCTTCTGC GGTTCCAAGA AATCGCTGGC GAGCGGCATC
CCGATGGCGA ACATCCTCTT CCCGGCGCAG ACCGTCGGGC TGATCGTGCT GCCGCTGATG
CTGTTCCACC AGTTCCAGCT CTTCGTCTGC ACGCTGATCG CCCAGCGCTT CGCCCGCCAG
CCGGCGGCGG CTCCCGCCAT CGCCGCCCCC GAACGCCGCC TCGCGGCCTG A
|
|---|
| Protein sequence | MSIRATLSRL GIDPYLFFLL GTVALAALLP ARGLAAVVVG HAVHWVVALL FFVYGAKLST
AEVLRGLLHW RLQGAVFACT FILFPALGLA AVTLLGSALP PALATGIIFV AILPSTVQSS
IAFTSISRGN VPASLCSASV SNLAGMVITP LLVMLLLHAK GGFSAGALED IALQLLAPFA
AGQLLRPILG PVLQRHRLIT TIVDRGSILV VVYAAFSAGM VGGIWSRVSP ESLVLVMLVD
AALLALVLTV TSLAGALGFS REDRITLIFC GSKKSLASGI PMANILFPAQ TVGLIVLPLM
LFHQFQLFVC TLIAQRFARQ PAAAPAIAAP ERRLAA
|
|---|
| |