| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1048 |
|---|
| Symbol | |
|---|
| ID | 5159496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1169370 |
|---|
| End bp | 1170080 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640552966 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001234183 |
|---|
| Protein GI | 148260056 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCG TTCTCGAAGC CGAGGGCCTG CAGACCTATT ACGGCAAGAG CCATATCCTG
CACGGCGTCT CGCTGAAGGT GAACCAGGGC GAGCTGATCG CCCTGCTCGG CCGCAACGGC
GCCGGCAAGA CCACCACCAT GCGCAGCGTC ATGGGCCTCA CCCCGCCCCG CGATGGCAAC
ATCAAGCTCT TTGGCAAGGA TGTGACCAGG GCGGCTTCCC ATCGCATCGC CAATGCCGGC
GTCGGCTATG TTCCCGAGGG CCGCAAGATC TTCGGGCACA TGACGGTGCA CGAGAACCTG
CTCGTTCCCC CCGAGACCAA GGGGCCGTGG ACGATCGAGA CGATCTACAA GCTCTTCCCG
CGCCTTGAGG AACGCAAGAC GAGCAAGGGC GGCCGGCTCT CCGGCGGCGA GCAGGAAATG
CTGGCCATCG CCCGCGCGCT GCTGCTCAAC CCGAAATTCC TCATCCTCGA CGAACCCTCG
CAGGGGCTCG CGCCGGTCAT CGTGCAGGAA GTCATGCGCA CGATCGGGCG GATGAAGGGG
GAGGGGATGT CGATCCTGCT GGTCGAGCAG AACGCGCATC TGGCCCTGCA ACTCGCCGAC
CGCGCCTATG TGCTCTCCGA CGGCGAGGTC GTCTATGACG GCTCCGCCGC CGAACTCGGT
GCGGATACGG AACGGATGGA ACACCTCGCC GGCGTCAGCC ACGCCGGCTG A
|
|---|
| Protein sequence | MSAVLEAEGL QTYYGKSHIL HGVSLKVNQG ELIALLGRNG AGKTTTMRSV MGLTPPRDGN
IKLFGKDVTR AASHRIANAG VGYVPEGRKI FGHMTVHENL LVPPETKGPW TIETIYKLFP
RLEERKTSKG GRLSGGEQEM LAIARALLLN PKFLILDEPS QGLAPVIVQE VMRTIGRMKG
EGMSILLVEQ NAHLALQLAD RAYVLSDGEV VYDGSAAELG ADTERMEHLA GVSHAG
|
|---|
| |