Gene Acry_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1043 
Symbol 
ID5159921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp1161838 
End bp1162821 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content76% 
IMG OID640552961 
ProductTRAP transporter solute receptor TAXI family protein 
Protein accessionYP_001234178 
Protein GI148260051 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGGG GACGGCGCGC GGTGTTGGGG GCGATGGCCG GGGCGCCTCT GGCGGCGCGG 
GCGGCGAGCC TGCCGGTGAT GCCGGTGGCC ATCACGATGG GGACCGGCCA GCCGGGCGGC 
GGGTTCTCGG TCTATGGCCA GGCCTGGGGA CAGCTGGCGC AGAAGGCCGC GCGGATTTCC 
GTGTCCTACC GCGCATCCGG CGGCAGCGCC GCCAACATCC TGCTGGTGGA GCAGCACGCG 
GCACAGCTGG GCCTCGCGGT GCTGGCCGTC GCCGAACAGG CCTGGATGGG CCAGGGCGCC 
TGGACCAGCG GCGTGAAGCT CCAGGGATTC CGCGCCCTGT TTCCGGTCTT TGGCGCGAGC 
TTGCAGATTT TCGCGCCGGC GCGGAGCGGG TTGCGCCGGC TGCGCGATCT GGACGGCAAG 
CGGATCGGCG TCGGCCCGGC CGGCGGTGCC GGGGCGGTGC TGGCGGCGGC GGCGCTCACC 
GCCGCCGGGG TGCGGCCGCA GCTGGCGATC GACGGGCTTT ATCACGAGCA GATCGAACTG 
CTGCAAAAGG GCCGGATCGA CGCCTGCGCC TTTTTCGGCG TCACGCCGCT GCCGGCGGTC 
CGCGCCGCGG CGGCGAGCGG CGGCTACAAC CTGATCGGCT TCGAGCGGGG CGAGATCGCG 
GCGGCGCGGC GGGCGCTGCC CGGCATCGGG CCGACGGTGA TCGGCCGCGA CGCGCTGCCG 
CATCTGTCCG CCGCGGTGGC GACGATCGGC TCCGAGGCGA TCGCCATCGG TGCGGCGAGC 
CTGCCGGAAG GGCTGGCCCA TGCGGTGACG CGGGCGGCGC TGATCCATCG CGCCGCCCTG 
CTGCGCACCC TGCCCGGCAG CGGGCCGGCG CGGCTGGACG CGGGCTGGAT CGACCGCAGT 
TCGCCGGTGC CCTTCCACCC CGGCGCGGCG GCGGCGCTGC GCGAGGCGGG GCTCGCCGTG 
CCGGACGCGC TGGTGCGCGG CTGA
 
Protein sequence
MARGRRAVLG AMAGAPLAAR AASLPVMPVA ITMGTGQPGG GFSVYGQAWG QLAQKAARIS 
VSYRASGGSA ANILLVEQHA AQLGLAVLAV AEQAWMGQGA WTSGVKLQGF RALFPVFGAS 
LQIFAPARSG LRRLRDLDGK RIGVGPAGGA GAVLAAAALT AAGVRPQLAI DGLYHEQIEL 
LQKGRIDACA FFGVTPLPAV RAAAASGGYN LIGFERGEIA AARRALPGIG PTVIGRDALP 
HLSAAVATIG SEAIAIGAAS LPEGLAHAVT RAALIHRAAL LRTLPGSGPA RLDAGWIDRS 
SPVPFHPGAA AALREAGLAV PDALVRG