Gene Acry_1014 details

Gene Information

• Locus tag: Acry_1014
• Symbol: prfA
• ID: 5160850
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1126729
• End bp: 1127787
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640552931
• Product: peptide chain release factor 1
• Protein accession: YP_001234150
• Protein GI: 148260023
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.222491
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTGG AGCAGAAACT CGACCGTATC GTCCTCCGCG CCGAGGAGCT GCGCGCGATG 
CTCGCCGCCG GGGTCGATGG CGAGCGCTTC GTCGCCGCCT CGCGGGAGCT GGCCGAGATC 
GAGCCGGTCG AGCAGCAGAT CCTCCTGCTC CGCGCCGCCG AGCGCGCCCG CGACGAGGCC 
GAGGCCGCCC GCGCCGATCC CGAGCTGCGC GAACTGGCCG ATGCCGAGCT CGATTCCCTG 
CGCGAGACCC TGCCGCGGCT CGAACACGAG ATCCGCCTCG CCCTCCTGCC GCGCGACGCC 
GCCGACGAAC GCCCCGCCAT CCTCGAAATC CGCCCCGCCG CCGGCGGCGA CGAGGCCGCG 
CTGTTCGCCG CCGAGCTCTT CGCCGCCTAT CGCCGCTACG CCGACCTGCG CGGCTGGCGC 
TTCGAGATCC TCGACTATAC CGAGACCGAG CTCGGCGGCC TGCGCGAGGG CATCGCCGAA 
ATCACCGGCC GCGCCGTCTT CGCCCGCCTC AAGTTCGAAA GCGGCGTCCA CCGCGTCCAG 
CGCGTCCCCG CCACCGAAAC CCAGGGCCGC ATCCACACCT CCACCGTCAC CGTCGCCGTC 
CTGCCCGAGG CGGAGGACGT CGATGTCGAG GTCAACGAGG CCGATCTCCG GATCGACGTC 
TTCCGCGCCT CCGGCGCCGG CGGCCAGCAC GTCAACAAGA CCGAGAGCGC CGTCCGCATC 
ACCCATCTGC CCACCGGCAT CGTCGTCGCC ATGCAGGAGG AGCGCAGCCA GCACAAGAAC 
CGCGCCAAGG CGATGAAGAT CCTGCGCGCC CGGCTCTACG AGCAGACCCG CGCCGCCGCC 
GCCGCCGGCC GCGCCGCCGA CCGCAAGTCC CAGGTCGGCA CCGGCGACCG TTCCGAGCGC 
ATCCGCACCT ACAATTTCCC GCAAGGCAGG GTCACCGACC ACCGGATCAA CCTCACCCTG 
CACAAGATCG ACCGCGTCAT GCTCGGCGAG TTCGACGAGA TCATCGACGC GCTGACCGAG 
GAAGACCAGG CCGCCCGCCT CGCCGCCGCC GGCGCATGA 

 

Protein sequence

MTLEQKLDRI VLRAEELRAM LAAGVDGERF VAASRELAEI EPVEQQILLL RAAERARDEA 
EAARADPELR ELADAELDSL RETLPRLEHE IRLALLPRDA ADERPAILEI RPAAGGDEAA 
LFAAELFAAY RRYADLRGWR FEILDYTETE LGGLREGIAE ITGRAVFARL KFESGVHRVQ 
RVPATETQGR IHTSTVTVAV LPEAEDVDVE VNEADLRIDV FRASGAGGQH VNKTESAVRI 
THLPTGIVVA MQEERSQHKN RAKAMKILRA RLYEQTRAAA AAGRAADRKS QVGTGDRSER 
IRTYNFPQGR VTDHRINLTL HKIDRVMLGE FDEIIDALTE EDQAARLAAA GA