| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1001 |
|---|
| Symbol | |
|---|
| ID | 5159560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1110260 |
|---|
| End bp | 1111234 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640552918 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001234137 |
|---|
| Protein GI | 148260010 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0569552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGGC CGCTGAACCC CGCCGCGCTG TCGCATTTCG GCTTCCTGCT GCTGCCGAAC
TATTCGATGA TCGCGGTGGC CAATGCGATC GAGGCGCTGC GGATGGCCAA TCGCTGCGCC
GGGCGGGCGG TGTATCGGTG GAGCCTGCAC GCGGTGGGCG AGACGCCGGT GACGGCGAGC
AACGGGCTGA GCCTCGGCGC GGTGACGGCG CCGGAGTCAG GGCCGGCGCC GGATATCCTG
TTCGTCTGCG GCGGGCTCGA CGTGCGCTCG GCCGTGGGGC GGCCGGTGCT CGCGGCGCTG
CGCCGCGCGG CGCGGGCGGG CACGCCGCTC GGCGCGCTCT GCACCGGCAC CTTCGCGCTC
GCCGCCGCCG GGCTGCTCGA CGAGTATCGC TGCGCCGTCC ACTGGGAGGA CATGCCGGCG
ATGCGCGCCG AGTTTCCGGA GATCGAACTG GTCAACGAGC TGTTCGTGCT CGACCGCAAC
CGGCTGACCT GCACCGGCGG CACCGGGCCG CTCGACATGA TGCTGGCGCT GATCGAGGCG
CGGCTCGGCC GCAACGTGGC CGAGCATGTG CGGGCGATTT TCGTGCTCGA CCGGATCCGC
CCGAGTGCCG AGCGCCAGCC GCTCGACAAG GACGACCGCG GCCATGCCGG GCAGCCGATG
CTGGCGCGGG CGATGGTGAT GATCGAGGCG CGGCTTGGGG AAAAGCAGAT TCTCGGCGAG
ATCGCGGGTG AGCTCGGCAT TTCGCTGCGG CAGTTGCAGC GGCTGTTCCG CGCCCATGTC
GGCGAGAGCC CGGCGGCGTT CATCCGGGCG CGGCGGCTGA AGCGGGCGCA GGGGATGCTG
CAATCGCTGC GGGTGCCGGT GACCGATGTG GCGATGGCCT GCGGGTTCGG CTCCAGCACG
CATTTCGCCA GCGCCTATCA CGATTATTTC GGACATCCGC CGCGCGCCGA GCGGCGGCCG
GGAGGCATTG CATGA
|
|---|
| Protein sequence | MPRPLNPAAL SHFGFLLLPN YSMIAVANAI EALRMANRCA GRAVYRWSLH AVGETPVTAS
NGLSLGAVTA PESGPAPDIL FVCGGLDVRS AVGRPVLAAL RRAARAGTPL GALCTGTFAL
AAAGLLDEYR CAVHWEDMPA MRAEFPEIEL VNELFVLDRN RLTCTGGTGP LDMMLALIEA
RLGRNVAEHV RAIFVLDRIR PSAERQPLDK DDRGHAGQPM LARAMVMIEA RLGEKQILGE
IAGELGISLR QLQRLFRAHV GESPAAFIRA RRLKRAQGML QSLRVPVTDV AMACGFGSST
HFASAYHDYF GHPPRAERRP GGIA
|
|---|
| |