| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0987 |
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| Symbol | |
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| ID | 5161763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 1091492 |
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| End bp | 1092436 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640552904 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001234123 |
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| Protein GI | 148259996 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.370865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT ACACAATCGG CGCAGCGCTG GCGTCAATCA CGATGAGTCT GGGCATAGCC
CACGCGGCGG TTCCCGCCTC GTGCAAGACG ATCCGCATGG CCAATATCGG CTGGACCGAC
AATGTGGTCC AGAACGCGGT CTTCTCGACG GTCGCCCAGG CGCTCGGCTA CAAGACCGAC
ATCAACCTCT ACTCGCTGGA GGTGATGTAT GCCGGTCTCA GCAACGGCAA GATCGACGTC
TTCCTCGACA ACTGGACACC GTCGCAGAAC CCGACCACCA CGCCCTACGA GAAGAAGCAC
GAGATCGACG TCATCGGCCC CGACCTCAAG CACGCCAAAT ACACGCTCGT GGTGCCGCAC
TACCTCTACG AGAAGGGCCT GAAGACCTTC GCCGACATCC ACAAGTTCGC CAAGGAACTG
AACTACAAGA TCTACGGCAT CGAGCCGGGC AACGACGGCA ACCTGCATAT CCTCGCCATG
ATCAAGGCGA ACAAGTTCGA CCTCGGCAAG TTCCATCTCG TGCAGTCGAG CGAGGCCGGC
ATGCTCGCCG AGGTCGCCCG CAAATACCCG AAGAAGAAGG ACATCGTCTT CCTCGGCTGG
GAACCCGAGC CGATGAACGT CGAGTTCCAC ATCAACTACC TCACCGGCGG CCGGGACTAT
TTCGGTCCTC ACAAAGGCGA GGCGACGCTC TACATCAACA CGCGCCACAA CTACGCCAAG
GACTGCCCGA ATGTCGGCGT CCTGCTGCAC CATTTCTACC TGTCGGTCGG CGACGAGAAC
AAGATGATGT ACGACGTCCA GGTCAAGCAT CAGGAGGCCC CCGCCGTCGC CGCCGCCTGG
CTGAAGGCGC ATCCCGCCTG GGTCAAGAAA ACCCTCGACG GCGTCACCAC GGTCGACGGC
AAGCCGGGCG CGGCGGCGGT GCTCGCCAGC CTGAAGTCGG ACTGA
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| Protein sequence | MKKYTIGAAL ASITMSLGIA HAAVPASCKT IRMANIGWTD NVVQNAVFST VAQALGYKTD
INLYSLEVMY AGLSNGKIDV FLDNWTPSQN PTTTPYEKKH EIDVIGPDLK HAKYTLVVPH
YLYEKGLKTF ADIHKFAKEL NYKIYGIEPG NDGNLHILAM IKANKFDLGK FHLVQSSEAG
MLAEVARKYP KKKDIVFLGW EPEPMNVEFH INYLTGGRDY FGPHKGEATL YINTRHNYAK
DCPNVGVLLH HFYLSVGDEN KMMYDVQVKH QEAPAVAAAW LKAHPAWVKK TLDGVTTVDG
KPGAAAVLAS LKSD
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