Gene Acry_0941 details

Gene Information

• Locus tag: Acry_0941
• ID: 5161145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1046231
• End bp: 1046908
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640552860
• Product: ABC transporter related
• Protein accession: YP_001234079
• Protein GI: 148259952
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAGG TTCTGAAACT CGAAGGTGTT GTTCGCACCT TTCACAGCGA GGGCGAGGAT 
CTGCACATCC TGCGCGGCGC CGATCTCCCG CTGCGCAGCG GCGAGATCGT CGCGCTGGTC 
GCCCCCTCCG GTTCCGGCAA ATCCACCCTG CTCCATCTCG CCGGGCTTCT CGAAAAGCCG 
GATGGCGGCA CCATCCGCAT CGGCGGGATC GATACCGCGC GCCTTTCAGA TTCCGAAAAG 
ACCACGCTGC GCCTTAATGA AATCGGCTTC GTCTACCAGG CACATCATCT GCTGGCCGAA 
TTCACGGCAC TGGAAAACGC AGCCCTGCCG CAGCTCATCG CCGGAAGCAC CCGCAAGGAT 
GCCGAGGCCC GCGCCGCCCA TCTGCTCGAT GCGTTCGGCC TCGCCGCGCG CGCGCATCAT 
CTGCCCGGCA AGCTCTCGGG CGGCGAGCGT CAGCGCGTTG CCATCGCGCG CGCCATGGCG 
AACGCGCCGA AGCTCCTGCT CGCCGACGAA CCGACCGGCA ATCTCGACGT CGCCACCGCC 
GATCTCGTGT TTGCCGAATT GCTGCGGGTA GTGCGGCACG AAAACATCGC GGCGCTGATC 
GCCACCCACA ACCCCGATCT TGCCGCGCGC ATGGATCGCG TGGTCATGCT GCGCGATGGC 
CATCTCGTGG ATGGCTGA 

 

Protein sequence

MSEVLKLEGV VRTFHSEGED LHILRGADLP LRSGEIVALV APSGSGKSTL LHLAGLLEKP 
DGGTIRIGGI DTARLSDSEK TTLRLNEIGF VYQAHHLLAE FTALENAALP QLIAGSTRKD 
AEARAAHLLD AFGLAARAHH LPGKLSGGER QRVAIARAMA NAPKLLLADE PTGNLDVATA 
DLVFAELLRV VRHENIAALI ATHNPDLAAR MDRVVMLRDG HLVDG