Gene Acry_0918 details

Gene Information

• Locus tag: Acry_0918
• Symbol: clpX
• ID: 5160394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1019750
• End bp: 1021006
• Gene Length: 1257 bp
• Protein Length: 418 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640552835
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_001234056
• Protein GI: 148259929
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACGA AGTCCGGAGA CTCGAAGAAC ACCCTGTATT GCTCGTTTTG CGGCAAGTCG 
CAGCACGAAG TGGTCAAGCT GATCGCGGGG CCGACGGTAT TCATCTGCAA TGAATGCGTC 
GAACTCTGCA TGGACATCAT TCGCGAGGAT AACCGGACGC ACCTCGTGAA AACGCGCGAC 
GGCGTGCCGA CGCCCCGCGA AATCTGCAAG GTGCTGGACG ATTACGTGAT CGGGCAGGAT 
CACGCCAAGC GGATTCTCAG TGTTGCCGTG CACAACCACT ACAAGCGGCT GGCGCACGCG 
CAGAAGAACA ACGACATCGA GATCGCGAAG TCGAACATCA TGCTGGTCGG GCCCACCGGC 
TCGGGCAAGA CGCTGCTCGC CCAGACGCTG GCCCGGATTC TCGACGTGCC GTTCACCATG 
GCGGACGCGA CGACCCTGAC CGAGGCGGGA TATGTCGGCG AGGATGTCGA GAACATCATC 
CTCAAGCTGC TGCAGGCCGC GGATTACAAT GTCGAGCGGG CGCAGCGCGG CATCGTCTAT 
ATCGACGAGG TCGACAAGAT CAGCCGCAAG TCCGACAACC CCTCAATCAC GCGCGACGTA 
TCCGGCGAGG GCGTGCAGCA GGCGCTGCTC AAGATCATGG AAGGGACGGT GGCCTCGGTG 
CCGCCGCAGG GCGGGCGGAA GCATCCGCAA CAGGAGTTCC TCCAGGTTGA TACCACCAAC 
ATCCTCTTCA TCTGCGGCGG CGCCTTCGCC GGGCTGGAGA AGATCATCGC ACAGCGTGGC 
AAGGGGTCGG GAATCGGCTT CGGCGCCGAT GTGCGCGACC CGACGGAGCA GCGCACCGGC 
GCGATCCTGC GCGAAGTCGA GCCCGAGGAT CTGCTGAAGT TCGGCCTGAT CCCCGAATTC 
ATTGGCCGTC TGCCCGTCGT TGCGACGCTC GAGGACCTCG ACGAGGCGGC GCTGATCGAG 
ATCCTCACCA AGCCGAAGAA CGCGCTTGTG AAGCAATACG GCCGCCTTTT CGAAATGGAG 
GGCGTGAAGC TCAACTTCAC CGAAGACGCG CTGAAAGTGG TCGCCGCCCG TGCGATCCAG 
CGCAAGACCG GGGCGCGTGG CCTGCGGTCG ATCATGGAAA ACATCCTGCT CGAGACGATG 
TTCGACCTCC CGGGCCTCGA CTCGGTCGAA GAGGTCGTGA TCAACGGCGA AGTAGCCGAG 
GGGCGGGCAA ATCCGCTTTT CCTGCATGGC AAGGAACGCG CTGAAACCGG CTCCTGA 

 

Protein sequence

MSTKSGDSKN TLYCSFCGKS QHEVVKLIAG PTVFICNECV ELCMDIIRED NRTHLVKTRD 
GVPTPREICK VLDDYVIGQD HAKRILSVAV HNHYKRLAHA QKNNDIEIAK SNIMLVGPTG 
SGKTLLAQTL ARILDVPFTM ADATTLTEAG YVGEDVENII LKLLQAADYN VERAQRGIVY 
IDEVDKISRK SDNPSITRDV SGEGVQQALL KIMEGTVASV PPQGGRKHPQ QEFLQVDTTN 
ILFICGGAFA GLEKIIAQRG KGSGIGFGAD VRDPTEQRTG AILREVEPED LLKFGLIPEF 
IGRLPVVATL EDLDEAALIE ILTKPKNALV KQYGRLFEME GVKLNFTEDA LKVVAARAIQ 
RKTGARGLRS IMENILLETM FDLPGLDSVE EVVINGEVAE GRANPLFLHG KERAETGS