Gene Acry_0915 details

Gene Information

• Locus tag: Acry_0915
• ID: 5162535
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1015253
• End bp: 1017229
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640552831
• Product: outer membrane autotransporter
• Protein accession: YP_001234053
• Protein GI: 148259926
• COG category: [I] Lipid transport and metabolism; [R] General function prediction only
• COG ID: [COG3240] Phospholipase/lecithinase/hemolysin
• TIGRFAM ID: [TIGR01414] outer membrane autotransporter barrel domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGAGCG AGATGACATT CGAGACATGC GTTCGGAGAC TGGCGATAGG CGCGCTCGCG 
GCCGGGTTCA TCGGGCTGGC GCCGGCGAGG GCGCAGGCGC CGGGCAGTCT TTACGTGTTC 
GGCGACAGCC TGAGCGATAA TGGCAACATT CCGCGGCTGA CCGGCGTTCC CTATCCGGGG 
CCGCCCTATG TCGGCTTCCG ATTCTCGAAC GGGCCGGTCT GGGCGGAATA CCTGCCCGGG 
CTGACCGGGC TGAATTTCAA GCCATCCAAC GACTATGCGG TGGGCGGCGC CTTTGCCGGG 
CCGCTGGTGG TCAATGGCGT GACCTACAAC AATCTCGTCA ATTTCCCGTC GACCTTGCTT 
CCCGGCCTGC CGAACGAATT GCAGGAAATC CAGGGCTTTG CCGCATCGGG CGGGCATTTT 
TCGCCTTCCG ATGTGGTGGG GATCTGGATC GGCGGGAATA ATTATTTCGC CACCGAGACG 
CTGGTCGGGG CGGACCCGGC CAATGCGCAG CAGATCGTCA GCCAGAACGT GAGCACCGTG 
CTCGCCCAGA CCGGGCAGGC GATCGGGCAG GTGGCCGCGC TCGGCGCGCG GCAGGTCGTG 
CTGCAGAATC TCGTGCCCTT CGGCAATGTG CCGACAGTGA ACGGCACGCC GCAGCTCGTA 
GCCCTCGGCG ACCAGATCAT CGCCGCGCAT AATGCGGGGC TCGCGACCCT GGCGGGGCAG 
CTGCATGCCT CGCTCGGGAT CAACATCCTC CTGATCAACC AGCAGCAGAT CTTCTCCGAG 
ATCAGCGCCA ATCCGGCTGC CTATGGCTTC ACCAACGTGA CCGACGCCTG CTTCGCCTCG 
GCAAGTTCCG CCTGCGCCTA TGCGCCGGCC TCGGTGCAGA ACCAGTATCT CTGGTGGAAC 
GTGCACCCGA CCACGCACGG GCACCAGGTG ATCGCCGAAT ATGTCGCGAG CGCGCTGAAC 
GGGTTCCAGT CGCTGTCCGT GCCGGCACGG CTGCTCGATG CCGGCGCCGC GGCCTTCGCG 
CAGACGATCG GCGCGAGGAT GGACGCGCTG CGCCACGGCG CCGGGGGGCT GACAGTCGAT 
CTCGCCGGCG GGCCGATGCT GGCCGATGCG GCGGCGGGCG ATACCGGGCC GATGGAGATG 
CCGGGCAATG GGCACGCGCT GTCGGTTTTC GTGGCCGGCG GCTACGGGTT CGGCGCGCGG 
GCGGCGGCGC CGGGCAGCCT CGGCTTCCAT GACCAGATCG GCACGGTGAC CGCCGGCGCG 
GATTACCGCT TCACCCGCCA TCTCGCCGCC GGCCTCGCGT TCGGGTATGC GCGGGAAAGC 
GCGACGGTGA ACGGGGGCGA GCGCCTGGAT GCCGATGCCT ACCAGTTTGC CGCCTATCTC 
GCCGCGCATA GCCGCCACCT CTATCTCGAC GCCCAGCTCG ATTACGGCCT CGACCGGTTC 
GGCCGGATCA GCCGGCCGGG CGTGCTGGCG CCGATCACCG CCTCGCCCCG CGGCCATACG 
CTCGGCGCCA CAATACAGGC GGGCTATGTG CTGCATCGCG GTGTCGTAGC GTTCGGCCCG 
ACAGTGGGGC TCGATGCGAC CGAAGCGCAT GTCGACCCGT ATACCGAGCA GGGCGACCCG 
GCGTTGACCA TGGCGGTCGG CGGCCAGGAT TTCGGGCGCG TGCTGTTCGG CGCCGGGCTT 
GCGGCTTCGG CGCGGGTCAG GCTGGGCGGA GTCGCGATTC GGCCGCATGG CTCGATCGGC 
ATGCAGGCCT CGATCGCCGG TGCGCCGGGG CAGTTCGCCA GCGTCTTCAC CGACGAGCCG 
CTGGTCGGCC TGACCACGAC CTATCCGCAG CTGTCGACGA TGTGGGGCGT GGCCGATGCC 
GGTGTCACGG CGCGGCTCGC CGGCAGGCTT TCGGCAACGG TCGACCTTGC GACGACCTTC 
GCGCGCCGCG CCGGCGAGCA GCGGATGGTC AGCGCCGGGC TGCGCTGGCG CTTCTGA 

 

Protein sequence

MGSEMTFETC VRRLAIGALA AGFIGLAPAR AQAPGSLYVF GDSLSDNGNI PRLTGVPYPG 
PPYVGFRFSN GPVWAEYLPG LTGLNFKPSN DYAVGGAFAG PLVVNGVTYN NLVNFPSTLL 
PGLPNELQEI QGFAASGGHF SPSDVVGIWI GGNNYFATET LVGADPANAQ QIVSQNVSTV 
LAQTGQAIGQ VAALGARQVV LQNLVPFGNV PTVNGTPQLV ALGDQIIAAH NAGLATLAGQ 
LHASLGINIL LINQQQIFSE ISANPAAYGF TNVTDACFAS ASSACAYAPA SVQNQYLWWN 
VHPTTHGHQV IAEYVASALN GFQSLSVPAR LLDAGAAAFA QTIGARMDAL RHGAGGLTVD 
LAGGPMLADA AAGDTGPMEM PGNGHALSVF VAGGYGFGAR AAAPGSLGFH DQIGTVTAGA 
DYRFTRHLAA GLAFGYARES ATVNGGERLD ADAYQFAAYL AAHSRHLYLD AQLDYGLDRF 
GRISRPGVLA PITASPRGHT LGATIQAGYV LHRGVVAFGP TVGLDATEAH VDPYTEQGDP 
ALTMAVGGQD FGRVLFGAGL AASARVRLGG VAIRPHGSIG MQASIAGAPG QFASVFTDEP 
LVGLTTTYPQ LSTMWGVADA GVTARLAGRL SATVDLATTF ARRAGEQRMV SAGLRWRF