Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0889 |
Symbol | |
ID | 5162489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 980257 |
End bp | 980853 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640552805 |
Product | hypothetical protein |
Protein accession | YP_001234027 |
Protein GI | 148259900 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000106051 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCGTG AGGCCGGCTT CACCCTGCTG GAGATGCTGG TCGCGCTGGT CGTGCTCGGC CTGCTGCTCG CGGGGCTCGC CCAGGCCAGC CATTTCGGCA TCGCGACCTA TCGCCGCACC ACCGCGACGA TCGCCGCCAC GTCCGACCGG CAGGCCACCT TCCGCGCCCT GCGCCGGCTG ATCGCCCAGG CCCGTCCGGG CCAGCCGCCA GGGACGCCGC ACACCCTCGC CCTCGTCACC ACCCTGCCGC GCGCCGCCGC GCTGTCGAAT CGCCTCGTCT TCGCCGAGAT CGGCGTCACC CGGTCCGGCG ATCTCGTCCT CGCCTGGCGG CCGGCGCCGA CCGGCCCGCC GCTCGACCCG CAGGCGGCGC GGGCCGGCGC GGCCCATGTC GAAATCCTCG CCCGCCACAT CGCCGCGATC GATCTGCGTT ACTGGTGGGC CGCGCGCCCG GGCGCGCCGC CCGCCTGGCA CGAGGCCGGT CCGGCAGGCG CGCTGCCGCG CCTCATCCGG CTGCGCATCC TCCCCGCCGC CGGGCAGCGT CCCTGGCCAG ACCTGATCGC CGCCCCCTGG CGCGCCCCCT TCGCCGCCGG CGGATAG
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Protein sequence | MRREAGFTLL EMLVALVVLG LLLAGLAQAS HFGIATYRRT TATIAATSDR QATFRALRRL IAQARPGQPP GTPHTLALVT TLPRAAALSN RLVFAEIGVT RSGDLVLAWR PAPTGPPLDP QAARAGAAHV EILARHIAAI DLRYWWAARP GAPPAWHEAG PAGALPRLIR LRILPAAGQR PWPDLIAAPW RAPFAAGG
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