Gene Acry_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0889 
Symbol 
ID5162489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp980257 
End bp980853 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content77% 
IMG OID640552805 
Producthypothetical protein 
Protein accessionYP_001234027 
Protein GI148259900 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000106051 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGTG AGGCCGGCTT CACCCTGCTG GAGATGCTGG TCGCGCTGGT CGTGCTCGGC 
CTGCTGCTCG CGGGGCTCGC CCAGGCCAGC CATTTCGGCA TCGCGACCTA TCGCCGCACC
ACCGCGACGA TCGCCGCCAC GTCCGACCGG CAGGCCACCT TCCGCGCCCT GCGCCGGCTG
ATCGCCCAGG CCCGTCCGGG CCAGCCGCCA GGGACGCCGC ACACCCTCGC CCTCGTCACC
ACCCTGCCGC GCGCCGCCGC GCTGTCGAAT CGCCTCGTCT TCGCCGAGAT CGGCGTCACC
CGGTCCGGCG ATCTCGTCCT CGCCTGGCGG CCGGCGCCGA CCGGCCCGCC GCTCGACCCG
CAGGCGGCGC GGGCCGGCGC GGCCCATGTC GAAATCCTCG CCCGCCACAT CGCCGCGATC
GATCTGCGTT ACTGGTGGGC CGCGCGCCCG GGCGCGCCGC CCGCCTGGCA CGAGGCCGGT
CCGGCAGGCG CGCTGCCGCG CCTCATCCGG CTGCGCATCC TCCCCGCCGC CGGGCAGCGT
CCCTGGCCAG ACCTGATCGC CGCCCCCTGG CGCGCCCCCT TCGCCGCCGG CGGATAG
 
Protein sequence
MRREAGFTLL EMLVALVVLG LLLAGLAQAS HFGIATYRRT TATIAATSDR QATFRALRRL 
IAQARPGQPP GTPHTLALVT TLPRAAALSN RLVFAEIGVT RSGDLVLAWR PAPTGPPLDP
QAARAGAAHV EILARHIAAI DLRYWWAARP GAPPAWHEAG PAGALPRLIR LRILPAAGQR
PWPDLIAAPW RAPFAAGG