Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0859 |
Symbol | |
ID | 5160361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 948009 |
End bp | 950438 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640552775 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001233997 |
Protein GI | 148259870 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGGAA AATTTCAGGT AAACGACGTT CTGATCATGC CGGCGAGTAC CGTGAACATA CAGCGACAAT CGTTTGTTCA GATAATTAAA CGAGGGCGTC TCTATAACGC GGTCTGGGCC ACGGATGTTG TCCCGGAGCA GCTTGTCGCA CCGATCGCCG TCGAAGGTCT CGAACTCAGG ATCAGGCTGA CGCGCGTCGC AAGCCTGGTC GGGCTTCTGG TCGCCGGCGC CATCGCGTTC GATTTCCATG CGACGACGCA GCGTCCATCG GTGCTCGCCG CCTTCCTCGC GCTTGCCATC ACCTATCTCG CGCTGTTCGG CTTCACCACG GCATGGCCCG TCATCCGCCG CCGGATCGCC GATTTCGGCC GCGCGAAGGC CGCGTTCAAC CGTCTCATCT TCGCGCTGGG CGTTTTCTGG GCCACCTATC TGGTCCTGCT CATGCGGGCC TCGGATTCCG CGAACCAGGC GCTCCTGCTC AGCATCATGA TCGGCCTGAT CTCGACGACG ATCTCCGCCG GCCCGCTCTC CTCGACCCTC TCGTTCTGGG CGCCGCTGAC CGTCGGCGCC TTCACCGCGC TCTATGTCTC GCACGATCTC TGGCGGCCGG TCTTCGTGAT CACGCTGGGG GCCTATTCCG CCTTCGTCTT CTTCACGATG GTCGTCCTCA ACCGCCGCAT GCTCGAACGC AGCGTCAACG CCCTCGAGCT CATGCGCACC AGCGAGACGA TCCAGATGCT GCTGCGCGAT TTCGAGGAGA ACGCGAGCGA CTGGCTCTGG GAGACCGACG CGGCGCTGAA CCTCGTTCAT CCCTCGGCGC GGCTGGCCGA GGTGGCGCAC CGCCCGGCCA GCGAAATCCG CGGCAACCTG TTCGATTTCA TGGCCGGCAC CGACGCCGCC CTGGCCAGCC CGGCGGATCC GGCCATCGAT CCCTATGCCG AGCTCCGCCG GCAGATCCGC ATGCGCCGCC CGTTCCGCGA TCTGGTGGTG CCGGTCTCGG CCGCGGGCGA GCGGCGCTGG TGGTCGCTGA CCGGCAAGCC GACGCTCGAT CACGAGGGCG CCTTCGCCGG CTATCGCGGC GTCGGCTCGG ATGTCACGGC CATGCAGCGC TCCCGCCAGC GCATCGACTT CCTCGCCCAG CACGACACGC TGACCGAGCT GATCAACCGC GCCGCCTTCG GCGTGCTGCT CGACCGCGCG CTCGCCCCCG GCAATGCCTG CGGCGCGGCG CTGCTCTATC TCGACCTCGA CCAGTTCAAG GCGGTGAACG ACAGCTACGG CCACGGCCTG GGCGACATCC TGCTGCGCGC CGTCGCCAGC CGGCTGCGCA ACGCCATCCG CGAAACCGAC ACCGCCGCCC GCCTCGGCGG CGACGAATTC GCCGTGCTGC TGCCCTCGAA CAGCCGGATC GACGCCACCG CGATGGCCGA CCGCATCATC GAGCGCCTGT CGCGCCCCTA CCGGTTCGAC GGCGTTTCGG TCGAGATCGG GGTGAGCATC GGCATCGCGC TCGCCCCCGC CGATGGCGAC CGCCAGGACC TGCTGTTCCG CAACGCCGAC CTCGCACTCT ACCGCGCCAA GAACGACGGC CGCGGCACCT GGCGGCTGTT CGACCAGGCG ATGGACCGCC AGGTGCAGAA CCAGCGCAGC CTGCGCCGCG ACATCAAGCG CGCCCTGCAC GACGGGCAGC TCTTCGTCGA ATACCAGCCC GTCGTCTGCC TGCGCACCCG CCGCATCCGC TCCGTCGAGG CGCTGGTCCG CTGGCGGCAT CCGCAGCGCG GCATCATCGG GCCGGAGGAT TTCATCGCCA TCGCCGAGCG CTGCGGCCTG ATCGGCGCCG TCACCCGCCA CGTCCTGACC GAGGCCGCCT CGCTGGCCAT CCGCCTGCCG TCCTCGGTCT CGGTCGCGAT CAACCTCTCG GCGCTGCACC TGCGCGAGGC CCTGCTGTTC GACCAGCTCT CGGCGGTGAT CTCCACCTCC GGCCTCGCCC CCGAGCGCGT CGAGTTCGAG GTGACCGAGA CCGCGCTGCT GACCACGGAC GACCGCACGA TCGACAATCT GCGTCGCCTG CGCCGCTTCG GCTGCCGCAT CGCGATCGAC GATTTCGGCA CCGGCTTCGC CTCGCTCTCC ACGCTGCGCT CCTTCCCCTT CGACCGGCTC AAGATCGACC GCAGCTTCAT CCACGAACTC GGCCGCGCCG AGAACGGCGA GCGGATCGTC AAGGCGATCG TCGAATTCGG CCAGACCCTC GGCCTGCTGA TCACCGTCGA GGGCGTCGAA ACCGAGGAAC ACGCCGCGAT GCTTTACGGC TATCGCGACA TCGATGCGCA GGGCTACCTC TTCTCCCCGC CCGTCTCCGG GGATAGGATA GTGGCCATCA CGGGTTCGGG CGTCGCGACG ATCGCGCCGG CCGAACCGGC GACCATGTGA
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Protein sequence | MNGKFQVNDV LIMPASTVNI QRQSFVQIIK RGRLYNAVWA TDVVPEQLVA PIAVEGLELR IRLTRVASLV GLLVAGAIAF DFHATTQRPS VLAAFLALAI TYLALFGFTT AWPVIRRRIA DFGRAKAAFN RLIFALGVFW ATYLVLLMRA SDSANQALLL SIMIGLISTT ISAGPLSSTL SFWAPLTVGA FTALYVSHDL WRPVFVITLG AYSAFVFFTM VVLNRRMLER SVNALELMRT SETIQMLLRD FEENASDWLW ETDAALNLVH PSARLAEVAH RPASEIRGNL FDFMAGTDAA LASPADPAID PYAELRRQIR MRRPFRDLVV PVSAAGERRW WSLTGKPTLD HEGAFAGYRG VGSDVTAMQR SRQRIDFLAQ HDTLTELINR AAFGVLLDRA LAPGNACGAA LLYLDLDQFK AVNDSYGHGL GDILLRAVAS RLRNAIRETD TAARLGGDEF AVLLPSNSRI DATAMADRII ERLSRPYRFD GVSVEIGVSI GIALAPADGD RQDLLFRNAD LALYRAKNDG RGTWRLFDQA MDRQVQNQRS LRRDIKRALH DGQLFVEYQP VVCLRTRRIR SVEALVRWRH PQRGIIGPED FIAIAERCGL IGAVTRHVLT EAASLAIRLP SSVSVAINLS ALHLREALLF DQLSAVISTS GLAPERVEFE VTETALLTTD DRTIDNLRRL RRFGCRIAID DFGTGFASLS TLRSFPFDRL KIDRSFIHEL GRAENGERIV KAIVEFGQTL GLLITVEGVE TEEHAAMLYG YRDIDAQGYL FSPPVSGDRI VAITGSGVAT IAPAEPATM
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