Gene Acry_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0859 
Symbol 
ID5160361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp948009 
End bp950438 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content68% 
IMG OID640552775 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001233997 
Protein GI148259870 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGAA AATTTCAGGT AAACGACGTT CTGATCATGC CGGCGAGTAC CGTGAACATA 
CAGCGACAAT CGTTTGTTCA GATAATTAAA CGAGGGCGTC TCTATAACGC GGTCTGGGCC
ACGGATGTTG TCCCGGAGCA GCTTGTCGCA CCGATCGCCG TCGAAGGTCT CGAACTCAGG
ATCAGGCTGA CGCGCGTCGC AAGCCTGGTC GGGCTTCTGG TCGCCGGCGC CATCGCGTTC
GATTTCCATG CGACGACGCA GCGTCCATCG GTGCTCGCCG CCTTCCTCGC GCTTGCCATC
ACCTATCTCG CGCTGTTCGG CTTCACCACG GCATGGCCCG TCATCCGCCG CCGGATCGCC
GATTTCGGCC GCGCGAAGGC CGCGTTCAAC CGTCTCATCT TCGCGCTGGG CGTTTTCTGG
GCCACCTATC TGGTCCTGCT CATGCGGGCC TCGGATTCCG CGAACCAGGC GCTCCTGCTC
AGCATCATGA TCGGCCTGAT CTCGACGACG ATCTCCGCCG GCCCGCTCTC CTCGACCCTC
TCGTTCTGGG CGCCGCTGAC CGTCGGCGCC TTCACCGCGC TCTATGTCTC GCACGATCTC
TGGCGGCCGG TCTTCGTGAT CACGCTGGGG GCCTATTCCG CCTTCGTCTT CTTCACGATG
GTCGTCCTCA ACCGCCGCAT GCTCGAACGC AGCGTCAACG CCCTCGAGCT CATGCGCACC
AGCGAGACGA TCCAGATGCT GCTGCGCGAT TTCGAGGAGA ACGCGAGCGA CTGGCTCTGG
GAGACCGACG CGGCGCTGAA CCTCGTTCAT CCCTCGGCGC GGCTGGCCGA GGTGGCGCAC
CGCCCGGCCA GCGAAATCCG CGGCAACCTG TTCGATTTCA TGGCCGGCAC CGACGCCGCC
CTGGCCAGCC CGGCGGATCC GGCCATCGAT CCCTATGCCG AGCTCCGCCG GCAGATCCGC
ATGCGCCGCC CGTTCCGCGA TCTGGTGGTG CCGGTCTCGG CCGCGGGCGA GCGGCGCTGG
TGGTCGCTGA CCGGCAAGCC GACGCTCGAT CACGAGGGCG CCTTCGCCGG CTATCGCGGC
GTCGGCTCGG ATGTCACGGC CATGCAGCGC TCCCGCCAGC GCATCGACTT CCTCGCCCAG
CACGACACGC TGACCGAGCT GATCAACCGC GCCGCCTTCG GCGTGCTGCT CGACCGCGCG
CTCGCCCCCG GCAATGCCTG CGGCGCGGCG CTGCTCTATC TCGACCTCGA CCAGTTCAAG
GCGGTGAACG ACAGCTACGG CCACGGCCTG GGCGACATCC TGCTGCGCGC CGTCGCCAGC
CGGCTGCGCA ACGCCATCCG CGAAACCGAC ACCGCCGCCC GCCTCGGCGG CGACGAATTC
GCCGTGCTGC TGCCCTCGAA CAGCCGGATC GACGCCACCG CGATGGCCGA CCGCATCATC
GAGCGCCTGT CGCGCCCCTA CCGGTTCGAC GGCGTTTCGG TCGAGATCGG GGTGAGCATC
GGCATCGCGC TCGCCCCCGC CGATGGCGAC CGCCAGGACC TGCTGTTCCG CAACGCCGAC
CTCGCACTCT ACCGCGCCAA GAACGACGGC CGCGGCACCT GGCGGCTGTT CGACCAGGCG
ATGGACCGCC AGGTGCAGAA CCAGCGCAGC CTGCGCCGCG ACATCAAGCG CGCCCTGCAC
GACGGGCAGC TCTTCGTCGA ATACCAGCCC GTCGTCTGCC TGCGCACCCG CCGCATCCGC
TCCGTCGAGG CGCTGGTCCG CTGGCGGCAT CCGCAGCGCG GCATCATCGG GCCGGAGGAT
TTCATCGCCA TCGCCGAGCG CTGCGGCCTG ATCGGCGCCG TCACCCGCCA CGTCCTGACC
GAGGCCGCCT CGCTGGCCAT CCGCCTGCCG TCCTCGGTCT CGGTCGCGAT CAACCTCTCG
GCGCTGCACC TGCGCGAGGC CCTGCTGTTC GACCAGCTCT CGGCGGTGAT CTCCACCTCC
GGCCTCGCCC CCGAGCGCGT CGAGTTCGAG GTGACCGAGA CCGCGCTGCT GACCACGGAC
GACCGCACGA TCGACAATCT GCGTCGCCTG CGCCGCTTCG GCTGCCGCAT CGCGATCGAC
GATTTCGGCA CCGGCTTCGC CTCGCTCTCC ACGCTGCGCT CCTTCCCCTT CGACCGGCTC
AAGATCGACC GCAGCTTCAT CCACGAACTC GGCCGCGCCG AGAACGGCGA GCGGATCGTC
AAGGCGATCG TCGAATTCGG CCAGACCCTC GGCCTGCTGA TCACCGTCGA GGGCGTCGAA
ACCGAGGAAC ACGCCGCGAT GCTTTACGGC TATCGCGACA TCGATGCGCA GGGCTACCTC
TTCTCCCCGC CCGTCTCCGG GGATAGGATA GTGGCCATCA CGGGTTCGGG CGTCGCGACG
ATCGCGCCGG CCGAACCGGC GACCATGTGA
 
Protein sequence
MNGKFQVNDV LIMPASTVNI QRQSFVQIIK RGRLYNAVWA TDVVPEQLVA PIAVEGLELR 
IRLTRVASLV GLLVAGAIAF DFHATTQRPS VLAAFLALAI TYLALFGFTT AWPVIRRRIA
DFGRAKAAFN RLIFALGVFW ATYLVLLMRA SDSANQALLL SIMIGLISTT ISAGPLSSTL
SFWAPLTVGA FTALYVSHDL WRPVFVITLG AYSAFVFFTM VVLNRRMLER SVNALELMRT
SETIQMLLRD FEENASDWLW ETDAALNLVH PSARLAEVAH RPASEIRGNL FDFMAGTDAA
LASPADPAID PYAELRRQIR MRRPFRDLVV PVSAAGERRW WSLTGKPTLD HEGAFAGYRG
VGSDVTAMQR SRQRIDFLAQ HDTLTELINR AAFGVLLDRA LAPGNACGAA LLYLDLDQFK
AVNDSYGHGL GDILLRAVAS RLRNAIRETD TAARLGGDEF AVLLPSNSRI DATAMADRII
ERLSRPYRFD GVSVEIGVSI GIALAPADGD RQDLLFRNAD LALYRAKNDG RGTWRLFDQA
MDRQVQNQRS LRRDIKRALH DGQLFVEYQP VVCLRTRRIR SVEALVRWRH PQRGIIGPED
FIAIAERCGL IGAVTRHVLT EAASLAIRLP SSVSVAINLS ALHLREALLF DQLSAVISTS
GLAPERVEFE VTETALLTTD DRTIDNLRRL RRFGCRIAID DFGTGFASLS TLRSFPFDRL
KIDRSFIHEL GRAENGERIV KAIVEFGQTL GLLITVEGVE TEEHAAMLYG YRDIDAQGYL
FSPPVSGDRI VAITGSGVAT IAPAEPATM