| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0720 |
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| Symbol | |
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| ID | 5161923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 804590 |
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| End bp | 806431 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640552636 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001233860 |
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| Protein GI | 148259733 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCAT GTTCTGCAAC CATGGCGTCC GGCAGGATGC GCCGCCCGGT TGCGAGGATC
GCCGATGCAG CACTGGATGG CGCTGGTGTC GTGCTGCTGG CGGTGGAGGT GCTGGTGCTG
TTCGCCGGCA TCATCGCGCG CACGGTGTTC ATCCATCCGC TCATCTGGTC GACGGAATTC
GCGAGGCTGG TGTTCGTCTG GCTCACCATG ATCGACGCCG CGATCGCGGT GCGCGACGAC
CGGCACATGC GGATGACGGC GCTGGTGCAC AGCCTGCCGG CGCACTGGCA GGCCCGGTTC
CGGGCCGGGG CGGATGTGAT CCAGCTCGCT TCCGTGCTGG CGATGATCGG GCCGAGCCTC
GTCTTCCTTC AGGTCGAGCA ATTGTCCTCG CTGTCGCAGC TCGGTATTTC CAGCGCCTGG
GAAGCGGCGG GGCTGGTGGC CGGCTTCGCG CTGATCGCGC TCTATCTGCT GCGCGACCTG
TTCGCGCATC GGGGCGGGGA TTTCTGGCGC GGCGCAGTGG GTGCGGCGGT CATCGTCGGG
GCGGCGTGGC TGGCCGGCCG GGCCCTGGCC GCCGACACGC TGGCGGAGGT GATCTTCGTT
TTCATCGCGA TGCTGTTCGC GACCGTGCTG GCCGGCGTGC CGATCGCCTT CGCCTTCGGC
TTCTGCACCA CCTTCTACCT GATGGTCACG CAGGGCGCGC CGCTCGCCGT GATGGCGAGC
CAGGTGGAGC AGGGCACCTC CTCGATCATC CTGCTCGCGG TGCCGCTGTT CGTGCTGCTT
GGCGGGCTGC TGACCGTCAC CCGGCTCGCG CCGGCGATGA TGCGGTTCCT CACCGAGCTG
ATCGGCCCGG TGAAGGGCGG GCTGTTCTAT GTGCTGATCG GCGGCATCCT GCTCGTCTCC
GGCATCTCCG GGGCGAAGAC GGCCGATCTC GCCGCCGTCG CGCCGATCGT GGTGCCCGAG
ATGAAGCGGC AGAAGATCGA CGAGGGGCAC ATACTCTCCG TCGTCTCGTG CTGCGGCGCG
ATGGCGGAGA CGATACCGCC CTCGATCGTG CTGATCATCA TCGGCGCGGT CACCGGAACC
TCGATTTCCG CGCTGTTCGC CGCGGGGCTG ATGCCGGCCA TCCTGCTGGC GGTCATCCTG
GCGCTGCTCT CGCGCATCTG GGCGGGGGCT GATGCGGCGG CCGCGGCGCC GCGGGTGCCG
GCGCGGCGGG TCCTGCGGAG CTTCCTCCAC GGCCTGCCCG CGCTGGCGCT GCCCTTCGTG
ATCCGCTTCG CCGTGATCGA CGGCATCGCC ACCGCGACCG AGGTCGCCAC CATCGGCACC
GTCTATGCGA TCGTGCTCGG GGTCGTGTTC TATGGCGGAT TCCGGCCGGC GGCGCTGTAT
GACTGCGCGG CGAAGGCGGT CGGGCTGTCG GGGGCGATCA TGTTCATCAT CGCGGTGGCG
ACCGCGATGA GCTGGACGCT GACGCAGTCC GGCTTCGCGG ACGACATCAC CCGGCTGATG
CTGGCCCTGC CGGGCGGGCG CTACGGCTTC CTGCTGGGCT CGATTTTCCT GATGATCGTG
CTCGGCAGCA TTCTCGAGGG CATCCCGATC CTGGTGCTGT TCGGGCCGAT CCTGTTTCCG
ATCGCCCGCA CGCTGCATAT CGGCGATGTG CGCTATGGCA TCATCGTCAT CCTTGCCATG
GGTATCGGCC TGTTCGCGCC GCCGTTCGGG CTTGGCTATT ACGCCGCCGG GATCATGACC
GACATCGACC CGAACCGGGC CCTGAAGACC ATCTGGGGCT ATCTCGCCGC GCTGGTCTTG
GGCCTGCTGG CGATCGCCTT CGTTCCCTGG GGCGCGCTCT GA
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| Protein sequence | MQACSATMAS GRMRRPVARI ADAALDGAGV VLLAVEVLVL FAGIIARTVF IHPLIWSTEF
ARLVFVWLTM IDAAIAVRDD RHMRMTALVH SLPAHWQARF RAGADVIQLA SVLAMIGPSL
VFLQVEQLSS LSQLGISSAW EAAGLVAGFA LIALYLLRDL FAHRGGDFWR GAVGAAVIVG
AAWLAGRALA ADTLAEVIFV FIAMLFATVL AGVPIAFAFG FCTTFYLMVT QGAPLAVMAS
QVEQGTSSII LLAVPLFVLL GGLLTVTRLA PAMMRFLTEL IGPVKGGLFY VLIGGILLVS
GISGAKTADL AAVAPIVVPE MKRQKIDEGH ILSVVSCCGA MAETIPPSIV LIIIGAVTGT
SISALFAAGL MPAILLAVIL ALLSRIWAGA DAAAAAPRVP ARRVLRSFLH GLPALALPFV
IRFAVIDGIA TATEVATIGT VYAIVLGVVF YGGFRPAALY DCAAKAVGLS GAIMFIIAVA
TAMSWTLTQS GFADDITRLM LALPGGRYGF LLGSIFLMIV LGSILEGIPI LVLFGPILFP
IARTLHIGDV RYGIIVILAM GIGLFAPPFG LGYYAAGIMT DIDPNRALKT IWGYLAALVL
GLLAIAFVPW GAL
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