Gene Acry_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0690 
Symbol 
ID5159790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp775828 
End bp776757 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID640552604 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001233830 
Protein GI148259703 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCAC GAACCCTGCG ACTGTCCGCC CTTTGCGCCG CCGCCATCGC GATCGCCCCG 
GCCCCGGCGC GGGCGCAGCC GCCAGCCGCC TGCCGCACGA TCCGCCTCGG CCATGGCGGA 
TGGCTCGACA ACCAGGTGCA GAACGCCGTC TTCGGCGCCG TCGTGGCACC CTTCGGCTAC 
CAGGTGAGGA TCGAGCCCGC CCGCCTCAAG ACGATCTACC ATCGCCTCGC CGACGGCCGG 
CTCGACGTCT ACCTGCAGGA CTGGCGGCCC GATAACTGGA TGTCATCGGT CACCGCGATC 
CGGGATTCCG ATGTCGCCCG CAAGCGCATC GCCGTGGCCG GGACCGACCT TTCCGGCGCC 
CGCCACACGC TCGCGGTGCC GGCCTATCTC TACCGCGCCG GCCTGAAGGA CTTCGCGGAC 
ATTCACAAGT TCGCCGGCCA ACTCGACCAC ACGATCTACG GCATCGAGCC CGACAATGTC 
GGCGATCGTC AGCTGCTGTC GATGATCCGC CGCAACACCG ACGGCCTCGG CGGCTTCCAC 
CTCGTGCAGG CTGGCGCCGG CGGCATGCTG CGGGCGCTGG CGGCGAAGAT CCGCCACCAC 
GAGCCGATCC TGTTCCTCGG CTGGCAGCCC GACGCGATGA ACGTCGAATA CCGCATCCGC 
TACCTCGGCG GCGGCGGCGC CGCCTTCGGC CACGACCAGG GGGCGGCGCG AAGCCTGATC 
CTGACGCGCG CCGGCTACGC CGCGCAATGC CCCGCCATCG GCGGCCTGCT GCACCGCTTC 
CGCCTGCCGG TCCGGGCGGA AAGCCGCATG ATGTACGACA TCCAGGTCAA GCGCGAGGCC 
GTCGGGCCGG TCGCCGCGGC ATGGATCGCC GCGCATCCGG CCTGGCTGAA GCGGATGCGC 
GCGCCACTCG CCTCTCCCGC GCGCGGCTGA
 
Protein sequence
MLARTLRLSA LCAAAIAIAP APARAQPPAA CRTIRLGHGG WLDNQVQNAV FGAVVAPFGY 
QVRIEPARLK TIYHRLADGR LDVYLQDWRP DNWMSSVTAI RDSDVARKRI AVAGTDLSGA 
RHTLAVPAYL YRAGLKDFAD IHKFAGQLDH TIYGIEPDNV GDRQLLSMIR RNTDGLGGFH 
LVQAGAGGML RALAAKIRHH EPILFLGWQP DAMNVEYRIR YLGGGGAAFG HDQGAARSLI 
LTRAGYAAQC PAIGGLLHRF RLPVRAESRM MYDIQVKREA VGPVAAAWIA AHPAWLKRMR 
APLASPARG