| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0677 |
|---|
| Symbol | |
|---|
| ID | 5159669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 763844 |
|---|
| End bp | 764740 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640552591 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001233817 |
|---|
| Protein GI | 148259690 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA TCGCCGCGCT GAAGCTCTAC ACGCGGGTCG CGCGCCTCGG CAGTTTTTCG
GCGGCGGGCA GGGAGAGCGG CATGTCGCAG CCGCAGGTCT CGCGCATGAT CGCCGAACTC
GAACAGGAAC TCGGCGCCAG GCTGCTGTCG AGGACGACGC GGGCGGTGGT GCCGACCGAG
GCCGGCAAGG CGTTCCTCCT CCGCATCGAG GCCATTCTCG CCGCGCTCGA CGAGGCCGGC
CAGAGCGTGC GCGAGGGCGG CGAGTTCCAC GGCATGCTGC GGCTCAGCAT GCCGACGAGT
TTCGGCATCC ATGTCGCGAT TCCGCGCCTC GCCGATTTCG CGGCCCGGCA TTCGCGGCTG
CAGATCCACC TCGAACTCGA CGACCGGCGG CAGGACCTGG TGCGCGAGGC GGTGGATGTC
GCGATCCGGA TCGGCGCGCT GCCGGATTCG GCGAGCGCCA CCGCCCGGCA GATCGCGCTG
GTCTCCCGGG TGATCGTGGC CTCGCCGGCC TACCTGGCCG CGAACGGCGC GCCGGCGCGG
CCCGAGGATC TGGCGGGCCA CCGGATCATC CGCGGCGCCG CCGCCGCCAA CCCCCTGGCC
TGGACCTTCG AGCGCGACGG CGAGAGCATC GCGGCACGGG TGCAGCCGCA GTTCACCACC
AACGATAACG AGGGGGCGAT CGTCGCCGCC ATCGCCGGGC TCGGCATCAC CTCGACCGGC
GAATGGGAGT GCCGGCGGGC GCTGGAGGAC GGCTCCCTCG TGCGCCTGCT GACGGACTGG
ACGATGGCCG ACGTTCCCGT GCACGCCTAT TTCCCGATGG GCCGGAACAC CCGCGCCGCG
GCGCGCGCGC TGATCGACCA TCTGCGGGAC GGGATCGCGG CGGACGGGCG GGGCTGA
|
|---|
| Protein sequence | MKDIAALKLY TRVARLGSFS AAGRESGMSQ PQVSRMIAEL EQELGARLLS RTTRAVVPTE
AGKAFLLRIE AILAALDEAG QSVREGGEFH GMLRLSMPTS FGIHVAIPRL ADFAARHSRL
QIHLELDDRR QDLVREAVDV AIRIGALPDS ASATARQIAL VSRVIVASPA YLAANGAPAR
PEDLAGHRII RGAAAANPLA WTFERDGESI AARVQPQFTT NDNEGAIVAA IAGLGITSTG
EWECRRALED GSLVRLLTDW TMADVPVHAY FPMGRNTRAA ARALIDHLRD GIAADGRG
|
|---|
| |