| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0641 |
|---|
| Symbol | |
|---|
| ID | 5160790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 723209 |
|---|
| End bp | 724993 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640552555 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001233781 |
|---|
| Protein GI | 148259654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00375147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACC ACCCGACGAC AGAGTTCTTC CGGCCGGACA CCACCCCGTC CGCCGACTGG
GGCGCGGCCG GCAACTGGAG CGGCGGCACC GTTCCCTCCG CCGGCGTCAC CGCCGAGATC
GTCGGGCTCT TCGCCTCGAT CGACCCGACC ATGACGATCG AGACCGCCAT CCGCCTGGAG
GGTGGCGCGG ACGCGGCCGG GCTGGTCGGC AACGGCGGCG CGGTTGCCCT GGGGCGAAAC
TCCTGGCTCG ACGTCGCCGC CGCCGCCGAC CTGTTCGCCT ATGATTCCGC CGTCGGCATG
GGGACCATCT CGCTCGCCTG CGACGCGACG CTCAATGTCG TGGTCGATCT CGGCGCCCTG
ACCGGGTTGC CCGGCGCGGC CCCGCCCAGC TTCGGCAATG ACGGCACGAT CGATATCGGC
GCCGGCGCGC TGGTCGAGAT CGGCGGCACG GCATTCGACA ATCGGGGCAC CGTCGATATT
GCCGCGGGCA CGCTCGCCGT CGAGGGCGGC GCCGTGCAAG GCGGCGGGCT GATCGCCCTG
AGCGGCGGCG CCTCCGCCCT GCTGGCCGAC GGCGTCGCCG GCCAGACCTT CCTGTTCGGC
CCCGGCGGCG GGACGCTGAC GCTCGAAGAT CCCTATCTCG GCCGTGGCGT CACGATCGCC
GACCTCGCGC CCGGCGACAC GATCGTCCTG CCGACGCTGC GCAACGGCGA GGTCCGCGAG
ACCGGCGATG CCGTGAGCCT CATCGACGCC GCCGGCCATG TCGACGGGCA GTTCGTGCTC
CGGGACGCGG CCGGCTTCCA TGTCGAGACC GGCTCCGGCG GAACGACGAT CAGCGGCGGC
GCCTACGATC CCCCCTGTTT CGCGCGCGGC ACCCTTATCC TGACCCGCGA AGGGCTTCGC
CCGGTCGAAA CCCTCGCCGC CGGCGACGAG GTCGTCACGG CCGACGGAAA GCTCGTGCCC
GTCATCTGGA CCGGTTCGCG CACGCTCGAT CTCGCGATGC ACCCGGCGCC CGAGAAGGTG
AAACCCGTCT GCTTCGCGCC CGGATCGATG GCCGACGGCG TCCCCGCCCG CCGCCTGCGG
CTTTCGCCCG ATCACGCGGT CTGGTTCGAC AACCTCCTGA TTCCCGCCAA GTTCCTCGTC
AACGGCGCGA CCATCACGCA GGACGAGGCC TGCCTCGCCA TCACCTACTA CCATGTCGAG
CTGGCCCGGC ACGACGTGAT CCTGGCCGAG GGCGCGCCAT GCGAGAGCTA CCTCGACACC
GGCAACCGCG CCGGCTTCAC CACGGCGCAG GCCTGGCCGG TCCGCGATCT CCGCTGGGAC
CGGGATGCCT GCGCGCCGCT CTGCACCGGC GGGCCGGCGC TCCTCGCGGT GCGGCAGCAG
CTGCATCATC GCGCGCTGTC CGAAGGCTTC CGGGTCGGCA CCGTCCGGGA CGCCGCGCTG
TGGACAGGAG GCGTGATCCT GCCCGTCGAA ACCGCAGACT GGCTGTCCCT CCCTTCCGGG
CATGACGGCA GGGCCATTCT CCGGTCATCG TGTTTCGTGC CGGCCTGCGT CGATCCCGCG
TCCGATGACC GGCGCACCCT CGGCGTCGCC CTCGCCGCGC TGCAGACCGA CCTCGGCGAG
ATTCAGCTCG ACAACTGTGC CGTCCAGGGT TTCCACAATC GTGCGTCAGG CGACGCGGCA
AGATGGACCA ATGGCCGTGG CGAAATCATG CTGCCACGCC AGGCTCGGCG CATCCGTGTC
TGCCTCGAAG CCTTCCCGCG CCTCTGGCAG CGGGCCGGCG GATAG
|
|---|
| Protein sequence | MADHPTTEFF RPDTTPSADW GAAGNWSGGT VPSAGVTAEI VGLFASIDPT MTIETAIRLE
GGADAAGLVG NGGAVALGRN SWLDVAAAAD LFAYDSAVGM GTISLACDAT LNVVVDLGAL
TGLPGAAPPS FGNDGTIDIG AGALVEIGGT AFDNRGTVDI AAGTLAVEGG AVQGGGLIAL
SGGASALLAD GVAGQTFLFG PGGGTLTLED PYLGRGVTIA DLAPGDTIVL PTLRNGEVRE
TGDAVSLIDA AGHVDGQFVL RDAAGFHVET GSGGTTISGG AYDPPCFARG TLILTREGLR
PVETLAAGDE VVTADGKLVP VIWTGSRTLD LAMHPAPEKV KPVCFAPGSM ADGVPARRLR
LSPDHAVWFD NLLIPAKFLV NGATITQDEA CLAITYYHVE LARHDVILAE GAPCESYLDT
GNRAGFTTAQ AWPVRDLRWD RDACAPLCTG GPALLAVRQQ LHHRALSEGF RVGTVRDAAL
WTGGVILPVE TADWLSLPSG HDGRAILRSS CFVPACVDPA SDDRRTLGVA LAALQTDLGE
IQLDNCAVQG FHNRASGDAA RWTNGRGEIM LPRQARRIRV CLEAFPRLWQ RAGG
|
|---|
| |