Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0630 |
Symbol | |
ID | 5160640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 711311 |
End bp | 712540 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640552545 |
Product | major facilitator transporter |
Protein accession | YP_001233771 |
Protein GI | 148259644 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0823424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGAAT GTATCACCGC GTCCCCGGCC GCCGTCGCGA AGACCGATGC CGCCCCCTCC TCCGCGCTGA CCACGCTGTT CGCGGTCGCG ACCGGCGCGG TCGTCGCCAA CATCTATTAC GTCCAGCCTC TGGTCGGCAC GATCGCGCCG GATATCGGCC TGCCGGCGCA GGTCGCGAGC CTGCTGGTGA CGCTGACGCA GCTCGGCTAC GCCGCCGGCC TGCTGCTGCT GGTGCCGCTG GGCGACCTGC TGGAGAACCG CAAGCTGATC GCGCGCATGG TCGGCGCCTC CGCCATCGCC CTCGGCCTCG CCGCCATCGC CTGGAACGGC ACGAGCTTCC TCGCCGCCTC GCTGCTGATC GGCGTCAGCT CCGCGGCGGT GCAGATCATG GTGCCGATGA TCGCCTCGCT GACGCCCGAT GCCATCCGCG GCCGCGTGGT GGGCAATGTG ATGGCCGGGC TGCTGCTCGG CATCCTGCTC GCCCGGCCGA TGGCGAGCTT CGTCGCCTGG CTCGCCGGCT GGCGGGCGGT GTTCGGCATT TCGGCGGCGG GCATCGCGCT GCTGGCGGTC CTGCTGCGGC TCAAGCTGCC GCGCGTCACG CCGAAGCTCG ATCATCGCTA TGGCGAGCTG ATCGTCTCGA TGCTCGGCCT CTACCGCACC GAGCCGACGC TGCGCCGCCG CGCCGCCTAC CAGACCTGCG CCTTCGCCGC CTTCACCCTG TACTGGACGG CGGCGCCGCT GCTGCTGCTG CATGAATTCC ACTACACCCA GTTCGGCATC GCGATCTTCG CCCTGGTCGG CGCCGCCGGC GCCGCCGCCG CGCCGATCGC CGGGCGGCTG GCCGATGCCG GATACGGCCG CCCCGGCACC GCGACCGCGC TGGCGCTGAT CGCCCTCTCC TTCCTGATCT CGGGCTACGG TGCCGCCATC CACAGCGTCG TCCTGCTCGC CGGCGCCGGC GTGCTGCTCG ATTTCGGCGT GCAGGCCAAC AACCTGTTCG GCCAGCGGGC GATCTACGCC CTCGCCCCCG AGCGGCGGGC CCGGCTGAAC GGCGCCTACA TGACCGCCTT CTTCCTCGGC GGCGCCGCCG GCTCGGCGGT GGCGAGCGAC CTGCTGATCC GCGGCGGCTG GACGCTGGTC GCCATCGTCG GCGGGGTGCT GCCGCTGCTC GCCCTGACCT ATTTCGGCAT CAACGAAGTG CGGCGGGCGG CGGCGCGGCA CCACGGATGA
|
Protein sequence | MSECITASPA AVAKTDAAPS SALTTLFAVA TGAVVANIYY VQPLVGTIAP DIGLPAQVAS LLVTLTQLGY AAGLLLLVPL GDLLENRKLI ARMVGASAIA LGLAAIAWNG TSFLAASLLI GVSSAAVQIM VPMIASLTPD AIRGRVVGNV MAGLLLGILL ARPMASFVAW LAGWRAVFGI SAAGIALLAV LLRLKLPRVT PKLDHRYGEL IVSMLGLYRT EPTLRRRAAY QTCAFAAFTL YWTAAPLLLL HEFHYTQFGI AIFALVGAAG AAAAPIAGRL ADAGYGRPGT ATALALIALS FLISGYGAAI HSVVLLAGAG VLLDFGVQAN NLFGQRAIYA LAPERRARLN GAYMTAFFLG GAAGSAVASD LLIRGGWTLV AIVGGVLPLL ALTYFGINEV RRAAARHHG
|
| |