| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0626 |
|---|
| Symbol | |
|---|
| ID | 5162334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 705828 |
|---|
| End bp | 707549 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640552540 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001233767 |
|---|
| Protein GI | 148259640 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.123922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT TCATCGCCGC GCGGCAGTTC CTTCTCGACC ACCGGACCGA TCTTGCCGCC
GCCTCCGCCG GATTCCGCTG GCCGGAGGCG CGGGATTTCA ACTGGGCGCT CGACTGGTTC
GATGCGCATC TCGCCCGCGA TGCCGGCAGC GCGCGGCGCC CGGCGCTGTG GATCGCCGAT
CCGGCGGGCG GGGAGGATGT GCGGCTGAGC TTCGCTGAAT TGTCCGCCCG GTCGAACCGG
ACGGCGAATT TCCTGCGCGC CCGGGGCGTG CGGCGGGGCG ACCGGCTGAT CCTGCTGCTC
GGCAATATCG TGCCGTTGTG GGAGGTGATG CTGGCGGCGA TCAAGCTCGG CGCGGTGGTG
ATTCCGGCAA CGACGCTGCT GACGCCCGAG GAGTTGCAGG ACCGGGTGGA GCGCGGGGCG
GCGCGTTTCG TGGTGACGAC GGCGGACCAG GCGGCGAAGT TCGACGCGGT GGCCGGCACG
TTCCAGCGGA TCGCGATCGG CGGCGCGCCC GATGGGTGGA CGCCCTACGC GCCCGAGGGC
GAGAGTGACG ATTTCGCGCC GGACGGGCCG ACCCGGGCGG ATGATCCGCT GCTGCTCTAT
TTCACCTCGG GCACCACGGC GAAGCCGAAA CTCGTTCTGC ATTCGCATTA TTCCTATCCG
GTCGGCAGTC TCTCGACGAT GTACTGGATC GGGTTGCGGC CGGGGGATGT GCATCTGAAC
ATTTCCTCGC CGGGCTGGGC GAAGCATGCC TGGAGCAGTT TCTTCGCGCC CTGGAACGCG
GGGGCGACGG TGTTCATCGT CAACCAGCCG CGCTTCGAGG CGAAGGCGCT GCTCGATACG
CTGGTCCGCT GCGGGGTGAC GACGCTGTGC GCGCCGCCGA CGGTCTGGCG GCTGCTGATC
CAGAACGATC TCGCGCAATG GAAGGTGGCG CTGCGCGAGC TGGCCTGCGC CGGCGAGCCG
CTGAACGCCG AGATCATCGA CCGGGTGCGG GCGATGTGGG GGCTGACGAT CCGCGACGGC
TACGGCCAGA CCGAGACGAC CGCGCAGATC GGCAATTCGC CCGGCCAGGC GGTGAAGCCG
GGGTCGATGG GCCGGCCGCT GCCGGGCTAC CGCATCGCCA TACTCGACCA GGCGAACGAT
TCGGTGACCG AGGGCGAGGT GGCGCTGCCG CTCGGCGCGG CGCGGCCGGC CGGGCTGATG
CGCGGCTATG TCGACGCCGA GACCGGCGCG CTGCGCGGCA CCGACGGCGC CTATTACCGG
ACCGGCGATG TCGCGCAGAT CGACGCCGAC GGCTATCTCA CCTTCGTCGG CCGGGCGGAT
GACGTGTTCA AGTCGTCGGA TTACCGGATC AGCCCGTTCG AGCTGGAGAG CGTGCTGATC
GAGCACGGAA GCGTCGCCGA GGCGGCGGTG GTGCCGAAGC CGGACGAGAT CCGCCTTTCG
GTGCCGGTGG CCTATGTCGC GCTGGTGCCG GGGACGGCGG CGGACCGGGC CACGGCGCTG
TCGATCTTCC GGCATGCGCG GGCGCGGCTG GCGCCGTTCA AGCGCATCCG CGAGATCGTG
TTCGTCACCG ACCTGCCGAA GACGATTTCG GGGAAGATCC GGCGCGTGCA GCTGCGGCGC
GGCGAGGCGG GCGGCGAGGC CGGGCTGGCG GGCGAGGTGG TGCGCTTCGC CGAGAGCGCG
TTTCCCGAGC TGGCCTCGGG CGAGGGCGGC GGCCCGGCGT GA
|
|---|
| Protein sequence | MTDFIAARQF LLDHRTDLAA ASAGFRWPEA RDFNWALDWF DAHLARDAGS ARRPALWIAD
PAGGEDVRLS FAELSARSNR TANFLRARGV RRGDRLILLL GNIVPLWEVM LAAIKLGAVV
IPATTLLTPE ELQDRVERGA ARFVVTTADQ AAKFDAVAGT FQRIAIGGAP DGWTPYAPEG
ESDDFAPDGP TRADDPLLLY FTSGTTAKPK LVLHSHYSYP VGSLSTMYWI GLRPGDVHLN
ISSPGWAKHA WSSFFAPWNA GATVFIVNQP RFEAKALLDT LVRCGVTTLC APPTVWRLLI
QNDLAQWKVA LRELACAGEP LNAEIIDRVR AMWGLTIRDG YGQTETTAQI GNSPGQAVKP
GSMGRPLPGY RIAILDQAND SVTEGEVALP LGAARPAGLM RGYVDAETGA LRGTDGAYYR
TGDVAQIDAD GYLTFVGRAD DVFKSSDYRI SPFELESVLI EHGSVAEAAV VPKPDEIRLS
VPVAYVALVP GTAADRATAL SIFRHARARL APFKRIREIV FVTDLPKTIS GKIRRVQLRR
GEAGGEAGLA GEVVRFAESA FPELASGEGG GPA
|
|---|
| |