Gene Acry_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0593 
Symbol 
ID5162558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp666868 
End bp667419 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content64% 
IMG OID640552509 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001233736 
Protein GI148259609 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.819921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCC GTCAGACGGC GTTGCCCGGC GTGGTGGTTG TCGAGAGCCC GGTCGTCACC 
GATGCGCGGG GGGCGTTCCA GCGCTGCTTC TGTTCGCGCG ATCTTGCACC GTTGCTGGGC 
ACGCGAGAGA TCGCGCAGAT CAACCGCTCG CTGACAGCGC GCTCAGGCAC TGTCCGGGGG 
TTGCATTTCC AGTTTCCGCC GCATGCCGAA ATGAAGCTGA TCCGCTGCCT GCGTGGAAGG 
GTCTGGGACG TCGCGGTCGA TCTGCGCGCG GGGTCGCCGC AACTCCTGCG GTGGCACGCC 
GAGGAACTGT CTGCGGCCAA CGGCAGGATG CTGGTGATCC CCGAGGGGGT CGCGCATGGG 
TTTCAGGCGC TCGAAAATGA CAGCGAGTTA TTGTATATCC ACACCGCGCA TTACGCGCAT 
GCGGCCGAAG GAGGCGTGCG CTGCGACGAT CCGCAACTTG GCATAGACTG GCCGATGATG 
GTCGGCGGAC TTTCCGATCG CGACCGCGCT CTGCCGATGC TGCCTGCCCT GTTCACGGGA 
TTTCCACAAT GA
 
Protein sequence
MDIRQTALPG VVVVESPVVT DARGAFQRCF CSRDLAPLLG TREIAQINRS LTARSGTVRG 
LHFQFPPHAE MKLIRCLRGR VWDVAVDLRA GSPQLLRWHA EELSAANGRM LVIPEGVAHG 
FQALENDSEL LYIHTAHYAH AAEGGVRCDD PQLGIDWPMM VGGLSDRDRA LPMLPALFTG 
FPQ