| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0567 |
|---|
| Symbol | |
|---|
| ID | 5160716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 634908 |
|---|
| End bp | 636041 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640552483 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001233710 |
|---|
| Protein GI | 148259583 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGT CCACAGCTTT CTACCGCGAG CGCCGCGCGC CTCTTCCGCC ATTTTCCGCA
ATACTGGGGA CCGATCAGGC CGAACGGCTG GCAATCGGCC TGACACTCAT TTCGATGGCG
CTTTATCTGT TCTGCCTGGT CGCGGAATGG ATCGGCGTCT CGTTGAATCT AGTCGATGCC
ACGCAGTCGC TATGGCTGAC CATCGTGGCG CTGGGCGGCG AAGTCGCGTT CTACGTGCTG
CTCAGGAGCG GGATCAGCAG GCGCTGGCCG GATCCGACGC TCAGCCTGCC GCAGATGGTC
TTCGCCATCA CGCTGCTCGG TGCCGCCTAT CTGATCAACC CGCAGGTACG CGGCGAATTG
CTGATGCTGG CCGCCCTGGT CCTCGAATTC GGCGCGTTCC AGCTCCCGCC CCGCCGGTGC
CGGGATCTGG GCTGGTTTGC CGTCGCGGTC TTCGGTGTCG CGATGGCCAT CGGCGCCACG
GTCTCTCCGG ATCGCTTCGA TCCGCGTATC GAGGTGTTCC AGTTCGCGCT GATGCTGGCG
TTCCTGCCGG TGATTGCCGG CATCGCCGGC AAGCTGAGCC AGATGCGCCT CGACCAGAAA
CAGCAGCGCC GGCAGCTTCG CGACGCGCTG AAACAGGTGC AGATCCTCGC AACGCGTGAT
GAACTGACGG GACTGCCAAA TCGCCGCCAC GCGCTTGAGT TGATCGAGCG CGAAACCGCC
CGCGCCTGCC GCAGCGGTGC CCCGCTCTGC GTCGCCATTC TCGATCTCGA CCATTTCAAG
CGGATCAACG ACACGTTTGG CCACGGCGTG GGCGATGAGG TGCTTCGCAC CTTCGGCCGC
GAGGGGCGTC TCGTGCTGCG CGCCGACAAT ATCTTCGCCC GGTGGGGCGG CGAGGAATTC
ATCCTCGTCA TGCCGGACAG CACGCTGATC GACGCGCAGA CCATCGTTCG CCGGCTGCGC
GAGCATATGG CAAGCCCGGA ATGCTGGGCG TCATGCCTGC GCGCCAGAAC GACATTCTCG
GCCGGGATCG CCGAGTTCCT GGTCGGCGAA ACCCTGGACG AGACATTCAT CCGCGCCGAC
GCGGCGCTTT ACGAGGCCAA GAAGCTCGGC CGGGACCTGA CGATGACCGC CTGA
|
|---|
| Protein sequence | MTESTAFYRE RRAPLPPFSA ILGTDQAERL AIGLTLISMA LYLFCLVAEW IGVSLNLVDA
TQSLWLTIVA LGGEVAFYVL LRSGISRRWP DPTLSLPQMV FAITLLGAAY LINPQVRGEL
LMLAALVLEF GAFQLPPRRC RDLGWFAVAV FGVAMAIGAT VSPDRFDPRI EVFQFALMLA
FLPVIAGIAG KLSQMRLDQK QQRRQLRDAL KQVQILATRD ELTGLPNRRH ALELIERETA
RACRSGAPLC VAILDLDHFK RINDTFGHGV GDEVLRTFGR EGRLVLRADN IFARWGGEEF
ILVMPDSTLI DAQTIVRRLR EHMASPECWA SCLRARTTFS AGIAEFLVGE TLDETFIRAD
AALYEAKKLG RDLTMTA
|
|---|
| |