| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0563 |
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| Symbol | |
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| ID | 5160569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 629702 |
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| End bp | 631261 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640552479 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001233706 |
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| Protein GI | 148259579 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCTG AGGTTTTTGC TCCCCGCCTG CGCCGGCGCG CCCTCATGGG CACGGCGATG
CTCGCCGCCA TGGCGCTCGG CGGCTGCGAA CTCGGGCCGA ATTTCCATGC GCCCCGGACC
AGGACGGCCG CTTCCTTTCT CGCCAATCGT CCGGCGCTGA CCTCGCCGGA CACGGTCAGC
CAGGGCAAGG TCGACCTCGC CTGGTGGCAG AGCTTTGACG ATCCGGCTCT GACCACGCTG
GAGCACGAGG CCATCGCCCG CAATCTCGAC GTGAAGGCCG CCACCGAGCG CCTCGCCGAA
GCCGAGGCCC AGGCGCAGAT CGAGGGTGCC GCCCTCTACC CGAACCTCAA TTTCTCCGGC
TCCTACACGC GCGAGAAGCC GAGCAACAAG GGCGTGTTCA CCGCCCTCAG CGGCGGCGGA
TCGACCTCGA CCAGCACCAA TGCCGGCTCC ACCGCCAGCG GCAGCTCGAC ATCGATCGGC
GGCGGCGGCC TGCCCGGCTC CGAGCTGCAG CCCTTCAACC TCTTCCAGTA CGGCTTCTCC
TCGGTCTTCG ATTTCGACCT CTGGGGCAAG AACCGCCGCG CCGTCGAGGC CTCGCTCGCC
GCCGTCCAGG CGTCGCGCGA TGCCCGCCGC GCCGTCCTCC TCAATACCGA GGCCGAGGTG
GCGCACGACT ACATCAACCT GCGCGCCCAG CAGGCGGTCC TCGCCATCAC CAGGCGCAAC
CTCGCCAGCG CCGAGCACAT CGCCAACCTG ACCCGCCAGC GCGAGCAGGC GGGCCTCGCC
AACGCGCTCG ACGTCGCCGA TGCCCAGGCC CAGGCCGAAT CCGTCCGCGC CCAGATCCCC
ACCCTGCGAA CCGCGATCGC GGCGGACATC AACCAGCTCA GCCTGCTGCT CGGCGAGGGC
CCGGAAGCGC TCCGCGCCCA GCTCGTGACC GCGAAGCCGA TTCCGCCAGT GCCCCCGGTG
GTGCCGATCG GCCTGCCCTC CCAGCTGCTC CAGCGCCGTC CGGACATCCG CGAGGCGACC
GCCCGCCTGC ACCAGGCCAC CGCCGAGATC GGCGTCGCGA CGGCGAGCTT CTTTCCCGAC
ATCTCCCTCG CCGGCTCGGT TTCGCTGCAG GCGCTGCAAT TCTCGAACCT GAACCAGCTC
TCCGCCGTCA CCTACGCAAT CGGCCCGCAG ATCACCATGC CCCTCTTCGA GGGCGGGCGC
CTGCGCGGCG AGCTCCACCT GCGAAAGGCG CAGCAGCGCG AGGCCGCGGT GAACTACGCG
AAAACCGTGC TCACCGCCTT CCACCAGGTC GACAATGCGC TGACCGCCTA TGACGAGGAG
CAAAAGACCC AGGCGGCGCT GCAGGCCGAT GTCACCCAGA CCCGCCGCGC CCTTTCACTC
GCCCAGGAAC GCTACCGCGA AGGCCTGATC GACTACCTGC AGGTTCTCAC CGCGCAGCAA
TCGGAGCTGG CGGCCGAACA GGCGCAGGCG CAGAGCCAGG CCAAGATCTC GACCGATCTC
GTTTCGCTGT ACCAGGCGCT CGGCGGCGGC TGGGAGCAAA ACGAGCCGGC GGCCGGCTGA
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| Protein sequence | MRSEVFAPRL RRRALMGTAM LAAMALGGCE LGPNFHAPRT RTAASFLANR PALTSPDTVS
QGKVDLAWWQ SFDDPALTTL EHEAIARNLD VKAATERLAE AEAQAQIEGA ALYPNLNFSG
SYTREKPSNK GVFTALSGGG STSTSTNAGS TASGSSTSIG GGGLPGSELQ PFNLFQYGFS
SVFDFDLWGK NRRAVEASLA AVQASRDARR AVLLNTEAEV AHDYINLRAQ QAVLAITRRN
LASAEHIANL TRQREQAGLA NALDVADAQA QAESVRAQIP TLRTAIAADI NQLSLLLGEG
PEALRAQLVT AKPIPPVPPV VPIGLPSQLL QRRPDIREAT ARLHQATAEI GVATASFFPD
ISLAGSVSLQ ALQFSNLNQL SAVTYAIGPQ ITMPLFEGGR LRGELHLRKA QQREAAVNYA
KTVLTAFHQV DNALTAYDEE QKTQAALQAD VTQTRRALSL AQERYREGLI DYLQVLTAQQ
SELAAEQAQA QSQAKISTDL VSLYQALGGG WEQNEPAAG
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