| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0542 |
|---|
| Symbol | |
|---|
| ID | 5159458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 604679 |
|---|
| End bp | 605812 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640552458 |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_001233685 |
|---|
| Protein GI | 148259558 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCC CGGTAGTCTC GGCGGCCATG AAACCGCACG ACGCAGCAAG CGAACCGGCC
GTGGCCGATC GACGCGGCCA GATTGTCCTC GAAGACATCA GCCGCGTTTT CGCCGCCGAT
GTCGTTGCCG TAGACCGCAT CAATCTGGTG ATACATCGAG GCGAATTCTT CACGCTGCTC
GGCCCTTCCG GCTGCGGCAA GACCACGTTG CTGCGCATGA TCGCCGGTTT CGAGACACCC
GATTCCGGAC GCATCCTGGT CTCCGGGCGA GAGATGCAGG CGGTGCCGGC GCATCGCCGC
CCGGTGAACA CGGTGTTCCA GTCCTATGCG CTGTTCCCGC ATCTGACGGT GGCGGAGAAC
ATCGCCTTCG GGCTGCGGAT GCGGGGGGTC GCGAAGGCCG AACGGCGCGA GCGGACACGG
CGGATCATGG AACTGCTGCA GATCGACGCC TTCGCCAATC GCAATCCGGC GCAGCTTTCC
GGCGGGCAGC GCCAGCGCGT TGCCCTCGCC CGCGCGCTGG TCAACGAGCC CGAGGTGGTC
CTGCTCGACG AACCGCTTTC CGCGCTCGAC GCCAAGCTGC GCGCGGAATT GCAGGTCGAG
CTGATGCGGA TGCAGAAAAG GCTTGGCATG ACCTTCATTT TCGTCACCCA CGATCAGCAC
GAGGCGCTGG TGATGAGCGA CCGGATCGGG GTGATGCAGC GCGGGCGGCT GCTCCAGGTC
GGACCGGTGC TTGATGTGTA TGAGCGGCCT TCGAGCGTTT TCGTCGCCGA ATTCCTGGGG
CTGTCGAATA TCTGGCCAGT CACCGCCCTG CCCGGCGGGC TGATTGACAC GCCGCTCGGG
CCGCTGGCGA TCGGCAACCC GGATCCGGCC TCCGGCACGG CGATGATCCG GCCCGAGAAG
ATCTGGATGT ACAGCGAAAG CGGCGCACCG ACGGGGCGGC CGAACATGGT TGCCGGCGTG
GTGCGCGAGG CGATCTACAT GGGCGCCTCG ACGCAGTATC GGGTGGAGCT GGAAAATGGC
GCGCCGCTGC TCGTCTACGA CACCAACAAC CAGGCGGCCG AACGCAGCTG GCGGCCCGGC
GAGGCGGTGA CCTGCGAGCT GAAGCCCGAA AATATCGTGC TCATCGGCTC ATGA
|
|---|
| Protein sequence | MAGPVVSAAM KPHDAASEPA VADRRGQIVL EDISRVFAAD VVAVDRINLV IHRGEFFTLL
GPSGCGKTTL LRMIAGFETP DSGRILVSGR EMQAVPAHRR PVNTVFQSYA LFPHLTVAEN
IAFGLRMRGV AKAERRERTR RIMELLQIDA FANRNPAQLS GGQRQRVALA RALVNEPEVV
LLDEPLSALD AKLRAELQVE LMRMQKRLGM TFIFVTHDQH EALVMSDRIG VMQRGRLLQV
GPVLDVYERP SSVFVAEFLG LSNIWPVTAL PGGLIDTPLG PLAIGNPDPA SGTAMIRPEK
IWMYSESGAP TGRPNMVAGV VREAIYMGAS TQYRVELENG APLLVYDTNN QAAERSWRPG
EAVTCELKPE NIVLIGS
|
|---|
| |