| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0522 |
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| Symbol | |
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| ID | 5160276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 579253 |
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| End bp | 582597 |
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| Gene Length | 3345 bp |
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| Protein Length | 1114 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640552438 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001233665 |
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| Protein GI | 148259538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCATGC GCGCCGGAGC TTGCCTCCTG TCACCCGCGA AAGCAGGGGA AGCCCGCTTG
CCGTCTGACG ATACGGAAAC GCGGCGCCTG GCCGCCCTTG GCCGTTACGA TATCGTCGGC
ACACCGGCGG AGGAGAGCTT CGATCGCTTT GCCCGCCTTG CGGCGCATGG GCTCGACATG
CCGATCGCCA CGGTATCCTT CGCGGATGCC TCCCGTCACT GGCTCAAGGC GAAGGTCGGC
ACCGATCTTG AGTGCATGCC CCGCGGCACC GTATTTTGCG AGCACACGAT CGGCACCGAC
AGTCCTCTTG TAGTGCCGGA TGCCCGCGAG GACGAACGCT TCCGTGACAA TCCGCTCGTC
GCCGATTTTC CCCATATCCG GTTTTACGCG GGTGCGCCGA TCATCACGCC GGACGGCTAT
CGTATCGGCA GCATGTGCGT GCTCTCGCCT GAGCCGCGTG CGGAATTCGA TGCGTCCAGC
CGGAAGTTCC TCACAGAACT CGCCCAGTCG GTGATGACCG AACTCGAACT GCGGCGGCTG
AACCGGGAGC AGGCGAAGGT ATCGGCCGAT CTTGCGTTCT GGAACCGCCT TTCCGAGGCG
ATTGCCGATG CGGCGAATTT CGACGCCGCT CTCGATCATG CCCTGGCCTG TTGCGCCGAA
CGCGCCGGTG CGGCGATCTG CTTTCTCGTC GCGTTTCATC CGGCATACCG GATGCTGGAA
TACGTCAAGT CGCATATCGC TCAAGACAGT GATCTGGCCG ACTTTGACAT GACCCCTTGG
TTTGCCGGCC ACCCGGTCGA CACCATCAGT TTCGGCGCGG CCCTCGTCGA GGGGCGGATG
TATGACAGCG GACCGATGAT GGACGCCGAT CCTGGGCCGG CGTACCCGCG CCTGCGCGAA
CTGGTCCGCG CCGGCATCCG CCGGCAGGTC GTCCATCCGT TCGATCTTGC CGACCGCCGT
TTCGGTCTGG TGCTCGATTT CAGGAGCCCG GCGATCGCGG AGGAAACGCA CGGCCTGATT
CTGGAATTCG TCGCCCGCCT GACCCCACTT CTGCTCGGGC GGCTGCGGGA GGACGCGCTC
GAGCGTGCCA ACCGGGCCCT GCGGACGATC CACGAAGCGA CCGAAGCCTT TGCGCACGCC
ACCACCGCGC AGGCGGTGTT CGACGCGGCC TGCCGGCTTG CGGTCGAGAC CGGAGGTTAC
AATACGTGCT GGGTCGGTCT GGCGCAGCAC GATCCTGAGA AATCGGTCAG CCTCGCGGCG
AGCGCCGGGC GTGGAACCGG GTATGTCGCG CAACTTCGCC TGTCCTGGGC GGATGTGCCC
AACGGCCGGG GGCCCGCCGG CACCGCAATC CGCGAACGCC GGATCTCCCG TTGGCGCGAC
ATTGCGGTCG ATCCCCGTTT CGAGCCCTGG CGGCACAAGG CGCTCGCCTC CGGGTTCCGG
TCCTGCATTT CGCTGCCGTT CGGCGGGGCC GGGATTCCGG CAGCCGGCGC GCTGACTCTC
TATTCCTCGG ACCCGATGGC CTTTGGAGAG GAGGAGCGCG ATCTCCTCGT GGAACTGACC
GCGAACATGA CCAAGGCTTT GCAGGCGTTC ACCACGCGGC AGGAACGCGA CGACGCACTG
ATGGCCCATT CGATGAGCGA GCGGCGGATC GACCGGCTGC TCGCCGCGAC TGGCGTCGTC
CTCTACGCTC TTGCCCTGCA CGGCGACGAG GCCGTTCTGG TCGACATGAG CGAGAATATC
GTTGACATGC TCGGCTACGC CACGGGGAAT ATCCGAGGAC TCGACTGGTG GCGAAACCAC
GTGCACCCCG AAGACCTGCC GCAGGCGGCC CTCGGTGTCC CGCGCACGGT CGAGAGCGGG
CAATTCGTTC ATCGCTACCG TATCAGGCAC CAGAACGGCG GCTATCGCTG GATCCATGAC
GAGAAGACCT TGCAGCGTGA TGCCGCCGGC AATCCGGTGG GTATCGTCGG TGTCTGGATC
GATATCACCG AACGCCGGGA GGCGGAGGAA CAGATCTATC GGCTTGCGCA TATCGATCCG
CTGACCGAGT TGCCGAACCG GCGTCTGCTG AACGAGCGCT TGCGCGAGGT GCTGATCGAG
GCGCGCCGGA CCGGCGTGCA GGGAGCATTG CTGTTCATCG ATCTCGATCG GTTCAAGACG
ATCAACGACA TGCTTGGCCA CTCGGCGGGT GATTCGGCGC TCCGGCAGGC TGCGCAGCGG
CTCCGCCAGG CGGTCCGCGC GGCCGATACG ATCGCCCGTG TCGGCGGCGA CGAATTTGTC
GTTCTCATTG CGGATGCCGG CAGCACGGTC GCCGATGCGG CCGATCATGC CGCCACGATC
GCCCGAAAGA TGATCGACGC GCTCACGGCA AGGCCTATCT CGATTGGCGA ACGTGAGTAC
CATCTCGGCG CCAGCATCGG CTTCACGATG TTTCCGAAGC CGGATGACAC GATCGATACC
CTGATCCGCG AAGCGGACAC GGCGATGTAT CAGGCCAAGG CCGGAGAAGC CGATGTCGTC
ATGTTCCGGC AGTCGATGCA TCTGTCGATC GTGGCGCGCC ATGCCATCGA AGACGAGATC
AGGAGTGCGC TGAAGGCTGG GCGGTTCGAG ATCTGGTTGC AGGACCAGGT GGAGTTGGGG
GGGAAGCCCG TCGGCGCGGA AGTCCTTCTG CGCCTGCGCG ATCGTGATGG TCGCATCGCC
GTCCCGTCCG AGTTCATCGG CATTGCCGAA TCATCCGGGC TGATTGTTCC GCTGGGCCGG
TGGCTGTTGC GCGAGGCGTG TGCGCTGCTG GCACGAGCCC ATCGCGACCG GCCGGACTGG
CGGCTATCGG TCAATGTCAG CCCGCGACAG TTCCGCGATC CTGCTTTCGT CACCGACGTG
ATTGCGGCCC TCGACATCTC CGGCGTGCCG GCGGACCGAC TTACGCTCGA GATTACCGAA
AATCTGCTGA TCAGGGATAC ATTCGAGATC GCCCGGATCA TGGGGATTCT GGCCGATCGC
GGCGTCCGCT TCTCGGTCGA CGACTTCGGG ACCGGCTATT CAAGCCTGCA CTACCTGCGC
CAGTTGCCGA TCCACGAAAT CAAGATCGAC AGAGGTTTCA TCGGCCAGGT GCCGGATGAT
GCGTCTTCCG TGGCGATCGT CGAGGCGATC CTCGCCATGG CCCGGCGGCT CGATCTCGAT
GTGGTGGCCG AAGGGGTCGA GACGCCGGAG CATGTCGCCT TCCTGAAGGC GCGCGGCTGT
CCGCGGATGC AGGGTTATTT CTTCGCCTGC CCGATACCCG TCTCGGAGTG GCTGGAACGG
TCCGCTCACA CGCCGGACGC CGGTGTGGCC AACGCCCGCC GATAG
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| Protein sequence | MTMRAGACLL SPAKAGEARL PSDDTETRRL AALGRYDIVG TPAEESFDRF ARLAAHGLDM
PIATVSFADA SRHWLKAKVG TDLECMPRGT VFCEHTIGTD SPLVVPDARE DERFRDNPLV
ADFPHIRFYA GAPIITPDGY RIGSMCVLSP EPRAEFDASS RKFLTELAQS VMTELELRRL
NREQAKVSAD LAFWNRLSEA IADAANFDAA LDHALACCAE RAGAAICFLV AFHPAYRMLE
YVKSHIAQDS DLADFDMTPW FAGHPVDTIS FGAALVEGRM YDSGPMMDAD PGPAYPRLRE
LVRAGIRRQV VHPFDLADRR FGLVLDFRSP AIAEETHGLI LEFVARLTPL LLGRLREDAL
ERANRALRTI HEATEAFAHA TTAQAVFDAA CRLAVETGGY NTCWVGLAQH DPEKSVSLAA
SAGRGTGYVA QLRLSWADVP NGRGPAGTAI RERRISRWRD IAVDPRFEPW RHKALASGFR
SCISLPFGGA GIPAAGALTL YSSDPMAFGE EERDLLVELT ANMTKALQAF TTRQERDDAL
MAHSMSERRI DRLLAATGVV LYALALHGDE AVLVDMSENI VDMLGYATGN IRGLDWWRNH
VHPEDLPQAA LGVPRTVESG QFVHRYRIRH QNGGYRWIHD EKTLQRDAAG NPVGIVGVWI
DITERREAEE QIYRLAHIDP LTELPNRRLL NERLREVLIE ARRTGVQGAL LFIDLDRFKT
INDMLGHSAG DSALRQAAQR LRQAVRAADT IARVGGDEFV VLIADAGSTV ADAADHAATI
ARKMIDALTA RPISIGEREY HLGASIGFTM FPKPDDTIDT LIREADTAMY QAKAGEADVV
MFRQSMHLSI VARHAIEDEI RSALKAGRFE IWLQDQVELG GKPVGAEVLL RLRDRDGRIA
VPSEFIGIAE SSGLIVPLGR WLLREACALL ARAHRDRPDW RLSVNVSPRQ FRDPAFVTDV
IAALDISGVP ADRLTLEITE NLLIRDTFEI ARIMGILADR GVRFSVDDFG TGYSSLHYLR
QLPIHEIKID RGFIGQVPDD ASSVAIVEAI LAMARRLDLD VVAEGVETPE HVAFLKARGC
PRMQGYFFAC PIPVSEWLER SAHTPDAGVA NARR
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