Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0501 |
Symbol | |
ID | 5162088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 557574 |
End bp | 558581 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640552417 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001233644 |
Protein GI | 148259517 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0579669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCACCA TGGAAGATGT TGCCCACAAG GCAGGCGTTT CGGTATCAAC CGTTTCGCAT GTCATCAACG GCACCAGAAA AGTCCGTCCC GCGACGGTCG AAGCTGTAAG GGATGCCATC AGGAAGACCG GCTACGTTCC GAACTCGCTG GCGCAGGCCC TGGCGGGAGC GTCGACGAAA ACGATCGGTG TGGCGATCTC GGCCCTGACA AATCATTATT TTGCGGAAAC GGTCCGTGTG ATCGAATCCG AATGCGCAAG GCGGGGCCTG ATGATATTCC TGGCCGACAC GCATGACGAT CCGGACCAGG AACTGCGGGT CATCAAGGCG CTGCACCAGC GCCGGGTGGA CGGCATCATT CTCGCACCGA CCGCGGGAAC CGACCGACGG GCGCTCGACT ACCTGAAGGG CAAGGGCATA CCGTCGGTGC TGGTCGATCG TATCGTTCGA GGCGAGTTTG ACCAGGTCGG CGTCGAGAAC ACCGTCGCGT GCCGCGAGCT GATCTCGCAT CTGATCGGCC ACGGCCATCG CCGCATCGGC TTCGTGGCGG GAGCCCCAGG AATTTCAACA TCGATCGAGC GGCTCGAAGG ATATCGCGAC GCCCTGCATC AGGCCGGCAT CCCGTTCGAT CCCACCTTGG TGTGTTGCGG AGAATCAGCA AACGAACCGG CACGCCGCGC CGTTCGCGAA CTGCTCCGGC TCGACCCACG GCCGACCGCG ATCGTGGCCT CCAACAACCT GATGATGATC GGCGCCATGC ACGCCTTGCG CGACGCCGGC ATAGAGGTGC CTGCGGGAAT GGCTCTGGTC GGGTTCGATG ATTTCGACTG GGCCGAACTC TTCAACCCCC GGCTCACAGT ACTCGCACAG CCACTCGAGG ACATCGCCAT GAAGGCGGTG GAACTGCTGA CGAGACGCAT CGCGCGGCCC GATGATCAAT TCGAAATCGT GCGTCTCACG CCGGAATTGA GGATCCGGAA CTCCTGCGGC TGCCAGGATC AGCGCTGA
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Protein sequence | MATMEDVAHK AGVSVSTVSH VINGTRKVRP ATVEAVRDAI RKTGYVPNSL AQALAGASTK TIGVAISALT NHYFAETVRV IESECARRGL MIFLADTHDD PDQELRVIKA LHQRRVDGII LAPTAGTDRR ALDYLKGKGI PSVLVDRIVR GEFDQVGVEN TVACRELISH LIGHGHRRIG FVAGAPGIST SIERLEGYRD ALHQAGIPFD PTLVCCGESA NEPARRAVRE LLRLDPRPTA IVASNNLMMI GAMHALRDAG IEVPAGMALV GFDDFDWAEL FNPRLTVLAQ PLEDIAMKAV ELLTRRIARP DDQFEIVRLT PELRIRNSCG CQDQR
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