Gene Acry_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0501 
Symbol 
ID5162088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp557574 
End bp558581 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content62% 
IMG OID640552417 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001233644 
Protein GI148259517 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0579669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCACCA TGGAAGATGT TGCCCACAAG GCAGGCGTTT CGGTATCAAC CGTTTCGCAT 
GTCATCAACG GCACCAGAAA AGTCCGTCCC GCGACGGTCG AAGCTGTAAG GGATGCCATC
AGGAAGACCG GCTACGTTCC GAACTCGCTG GCGCAGGCCC TGGCGGGAGC GTCGACGAAA
ACGATCGGTG TGGCGATCTC GGCCCTGACA AATCATTATT TTGCGGAAAC GGTCCGTGTG
ATCGAATCCG AATGCGCAAG GCGGGGCCTG ATGATATTCC TGGCCGACAC GCATGACGAT
CCGGACCAGG AACTGCGGGT CATCAAGGCG CTGCACCAGC GCCGGGTGGA CGGCATCATT
CTCGCACCGA CCGCGGGAAC CGACCGACGG GCGCTCGACT ACCTGAAGGG CAAGGGCATA
CCGTCGGTGC TGGTCGATCG TATCGTTCGA GGCGAGTTTG ACCAGGTCGG CGTCGAGAAC
ACCGTCGCGT GCCGCGAGCT GATCTCGCAT CTGATCGGCC ACGGCCATCG CCGCATCGGC
TTCGTGGCGG GAGCCCCAGG AATTTCAACA TCGATCGAGC GGCTCGAAGG ATATCGCGAC
GCCCTGCATC AGGCCGGCAT CCCGTTCGAT CCCACCTTGG TGTGTTGCGG AGAATCAGCA
AACGAACCGG CACGCCGCGC CGTTCGCGAA CTGCTCCGGC TCGACCCACG GCCGACCGCG
ATCGTGGCCT CCAACAACCT GATGATGATC GGCGCCATGC ACGCCTTGCG CGACGCCGGC
ATAGAGGTGC CTGCGGGAAT GGCTCTGGTC GGGTTCGATG ATTTCGACTG GGCCGAACTC
TTCAACCCCC GGCTCACAGT ACTCGCACAG CCACTCGAGG ACATCGCCAT GAAGGCGGTG
GAACTGCTGA CGAGACGCAT CGCGCGGCCC GATGATCAAT TCGAAATCGT GCGTCTCACG
CCGGAATTGA GGATCCGGAA CTCCTGCGGC TGCCAGGATC AGCGCTGA
 
Protein sequence
MATMEDVAHK AGVSVSTVSH VINGTRKVRP ATVEAVRDAI RKTGYVPNSL AQALAGASTK 
TIGVAISALT NHYFAETVRV IESECARRGL MIFLADTHDD PDQELRVIKA LHQRRVDGII
LAPTAGTDRR ALDYLKGKGI PSVLVDRIVR GEFDQVGVEN TVACRELISH LIGHGHRRIG
FVAGAPGIST SIERLEGYRD ALHQAGIPFD PTLVCCGESA NEPARRAVRE LLRLDPRPTA
IVASNNLMMI GAMHALRDAG IEVPAGMALV GFDDFDWAEL FNPRLTVLAQ PLEDIAMKAV
ELLTRRIARP DDQFEIVRLT PELRIRNSCG CQDQR