Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0479 |
Symbol | |
ID | 5161154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 532266 |
End bp | 533063 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640552395 |
Product | TPR repeat-containing protein |
Protein accession | YP_001233622 |
Protein GI | 148259495 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA CGGGGAACCG CACCCGGCAG ATGCGGGCGG CGGTGCTCGC CCTCGCCGCG GCATCGCTCG CCGGCTGCGC GGCGCCGCAA AGAATGGGTG CGAACGAACC GACGCTCGGC GCCAACACGC TGAACGTTGC CAGAACGGCG CTTGCGGGCA ACCGGCCGGA TCTCGCCCTG CATGTCGCCA ACGCGGTGCT GAAGGTTGAT CCTGGCAATG ACGAGGCGCG GCTGGTGCAT GGCGACGCCG CCTATCTGCT CGGCGACTGC CGGACGGCGT CGGCCGATTA CCGGGCGGTG CTGAAGGCCG CGCCACACAC GGCGGGAGCG GAGATCGGCC TCGGGCGCTG TGCGCTCCGC ACGAATGGTC GGGGCGCGGT TGCTGCGTTC CGGCAGGCGG CGGGCGACGA TCCGCACAAC GCCGTCGCCT TCAATGATCT CGGCGTCGCC CTTGCCAAGC GGGGCGCGTT CGGCGCCGCG GTTCCGGCAT TCCGCAAGGC GCTGGCGCTC CGCCCGTCGT TCGCGGCGGC GCGTGCCAAT CTGGGGCTTG CGACCGCGCT CGAAGGACAG CCTGGCGCCG GCGCGGCGAT CATCGCGCCG CTCGCGCAGG GGGCGCAGGC CTCGGCGCCG GAACGCGCGA ATTACGCCGC TGCGCTGGCG ATGGCCGGGG ATGAAGCCTC GGCGCAACGC GTGCTGAGCG CAGACATGCC GGCGGCCGAG GCTCGCGACA TGGTGGCACA GCTGGCGCGG ATCACGACCG TGCCGCATGC CGGTCAACCG CCGCACGCGG CCAATTAA
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Protein sequence | MSATGNRTRQ MRAAVLALAA ASLAGCAAPQ RMGANEPTLG ANTLNVARTA LAGNRPDLAL HVANAVLKVD PGNDEARLVH GDAAYLLGDC RTASADYRAV LKAAPHTAGA EIGLGRCALR TNGRGAVAAF RQAAGDDPHN AVAFNDLGVA LAKRGAFGAA VPAFRKALAL RPSFAAARAN LGLATALEGQ PGAGAAIIAP LAQGAQASAP ERANYAAALA MAGDEASAQR VLSADMPAAE ARDMVAQLAR ITTVPHAGQP PHAAN
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