Gene Acry_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0479 
Symbol 
ID5161154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp532266 
End bp533063 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content73% 
IMG OID640552395 
ProductTPR repeat-containing protein 
Protein accessionYP_001233622 
Protein GI148259495 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCA CGGGGAACCG CACCCGGCAG ATGCGGGCGG CGGTGCTCGC CCTCGCCGCG 
GCATCGCTCG CCGGCTGCGC GGCGCCGCAA AGAATGGGTG CGAACGAACC GACGCTCGGC
GCCAACACGC TGAACGTTGC CAGAACGGCG CTTGCGGGCA ACCGGCCGGA TCTCGCCCTG
CATGTCGCCA ACGCGGTGCT GAAGGTTGAT CCTGGCAATG ACGAGGCGCG GCTGGTGCAT
GGCGACGCCG CCTATCTGCT CGGCGACTGC CGGACGGCGT CGGCCGATTA CCGGGCGGTG
CTGAAGGCCG CGCCACACAC GGCGGGAGCG GAGATCGGCC TCGGGCGCTG TGCGCTCCGC
ACGAATGGTC GGGGCGCGGT TGCTGCGTTC CGGCAGGCGG CGGGCGACGA TCCGCACAAC
GCCGTCGCCT TCAATGATCT CGGCGTCGCC CTTGCCAAGC GGGGCGCGTT CGGCGCCGCG
GTTCCGGCAT TCCGCAAGGC GCTGGCGCTC CGCCCGTCGT TCGCGGCGGC GCGTGCCAAT
CTGGGGCTTG CGACCGCGCT CGAAGGACAG CCTGGCGCCG GCGCGGCGAT CATCGCGCCG
CTCGCGCAGG GGGCGCAGGC CTCGGCGCCG GAACGCGCGA ATTACGCCGC TGCGCTGGCG
ATGGCCGGGG ATGAAGCCTC GGCGCAACGC GTGCTGAGCG CAGACATGCC GGCGGCCGAG
GCTCGCGACA TGGTGGCACA GCTGGCGCGG ATCACGACCG TGCCGCATGC CGGTCAACCG
CCGCACGCGG CCAATTAA
 
Protein sequence
MSATGNRTRQ MRAAVLALAA ASLAGCAAPQ RMGANEPTLG ANTLNVARTA LAGNRPDLAL 
HVANAVLKVD PGNDEARLVH GDAAYLLGDC RTASADYRAV LKAAPHTAGA EIGLGRCALR
TNGRGAVAAF RQAAGDDPHN AVAFNDLGVA LAKRGAFGAA VPAFRKALAL RPSFAAARAN
LGLATALEGQ PGAGAAIIAP LAQGAQASAP ERANYAAALA MAGDEASAQR VLSADMPAAE
ARDMVAQLAR ITTVPHAGQP PHAAN