Gene Acry_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0374 
Symbol 
ID5159923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp426557 
End bp427186 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID640552291 
Productpeptide deformylase 
Protein accessionYP_001233518 
Protein GI148259391 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAACAG TCTTGTCGGG GCTGGCAAGC GCAATCCCGC TTTGCGATCC GGCGGAATTG 
CGCCATGTGT CGGGCATGGC GCTTCTGAAA CTGGCCCGGC TGGGCCATCC CGTGCTGTTC 
GCGAAGGCCG AGCCGGTCGC GGATCCGGCC GCGCCGGAGA TTGCCCGCCT GTTGCACGAC 
ATGGCCGAGA CGCTGGCGGA TGCCGGAGGC GTCGGCCTTG CGGCGCCACA GGTGCATGTG 
CCGCTGCGGC TCTTCATCTA TCGGGTGCCG GAGAGCCGCG CCGGCGGCGG CGAGCATGAT 
GGCCCGCGCG GTCTTTCGGC GGTGATCAAT CCGGAACTCG TCCTGCATCC CGGAGAACCA 
GTCGAGGACT GGGAAGGGTG CCTGTCGATT CCCGGCATGA GCGCGCTGGT GCCCCGCGCC 
GCCAGACTGA CACTGCGCGC CATAGACGCG ACCGGCGCGC CGTTCAGCCG GGAGGCCGCG 
GGGTTTCACG CCCGCGTGAT CCAGCACGAG GCCGATCATC TGGACGGCAT TCTCTATCCG 
CAGCGCCTGC GCGACCCGCG GCTGATGGGA TTCAACGAGG AAGTGGCGCG GTTCCGCGAC 
GAGATCGCGC GCGCCGCAGG AGAGTTGTGA
 
Protein sequence
MPTVLSGLAS AIPLCDPAEL RHVSGMALLK LARLGHPVLF AKAEPVADPA APEIARLLHD 
MAETLADAGG VGLAAPQVHV PLRLFIYRVP ESRAGGGEHD GPRGLSAVIN PELVLHPGEP 
VEDWEGCLSI PGMSALVPRA ARLTLRAIDA TGAPFSREAA GFHARVIQHE ADHLDGILYP 
QRLRDPRLMG FNEEVARFRD EIARAAGEL