| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0369 |
|---|
| Symbol | |
|---|
| ID | 5161454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 421480 |
|---|
| End bp | 423633 |
|---|
| Gene Length | 2154 bp |
|---|
| Protein Length | 717 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640552286 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_001233513 |
|---|
| Protein GI | 148259386 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTTG ACAAGTATTT CCGCAAGGAA CTCGACTGGG GCGGGCGCAA GCTCATCCTC
GAAACCGGCA AGGTTGCCCG CCAGGCCGAT GGCGCCGTCG TCGCCTCCTA TGGCGACACC
GTGGTGCTCG CCACCGTGGT CGGCGCCCGC TCGGTGAAGC CGGGGCAGGA TTTCTTCCCG
CTCACCGTGA ACTACCAGGA GAAATTCTAC GCCGCCGGCC GGATTCCCGG CGGTTTCTTC
AAGCGCGAAG GCCGCCCGAC CGAGCGTGAG ACGCTGACCT CCCGCCTGAT CGACCGGCCG
ATCCGCCCGC TCTTCCCGCA CGGGTTCCGC AACGAGGTGC AGGTCATCGT CAACGTGCTC
AGCCACGACC TCGAGAACGA GCCGGACATC GTCTCGCTCG TCGCCGCCTC GGCCGCGCTG
ACCCTCTCCG GCATTCCGTT CTTCGGCCCG GTCGGCGCCG CCCGCATCGG CTATATCGAC
GGTGAATACA TCCTGAACCC GACCTCCGCG CAGATTGCCG AAAGCCGGCT CGACCTCGTG
CTCGCCGGCA CGGAAGAGGG CGTGCTGATG GTCGAGTCCG AGGCGCACGA GCTGTCGGAA
GAAACCATGC TCGGCGCCGT CACCTTCGGC CATGCGGCGT TCCAGCCGGT GATCCAGGCG
ATCATCGAGC TCGCCGAGCA TGCCGCGAAG GACCCCTGGC CGCTCGTCGA GGAGAGCGAC
GAGGAGAAGG CGCTCGCCGC CCGCGTCGAC GAACTCGCCC GCGAGGGCCT ACGCGCCGCC
TATGCCGAGC GCGAGAAGAC CGCCCGCCAC GAGAAGATCG GCGCGGTGAA GGCCGCGGTG
CTGGAGACGC TCGCCGCCGA GGAGCGGTCG GTCGAGAAGG CCAAGGGCAT GTTCAAGGAG
CTCGAGGCCG ACATCGTCCG CAACGCGATC CTCGACAACG GCATCCGCAT CGACGGGCGC
GACACCCGCA CCGTCCGCCC GATCCTCGCC GAGGTCGGCG TGCTGCCGCG CACCCATGGC
TCCGCTCTGT TCACCCGCGG CGAGACCCAG GCCCTCGTGG TCGCGACCCT CGGCACCGCG
CAGGACGAGC AGATCGTCGA TGCGATCGAG GGCGAATACC GCGAGCGCTT CCTGCTGCAC
TACAATTTCC CGCCCTTCTC GGTGGGCGAG ACCGGCCGCG TCGGCAGCCC CGGCCGCCGC
GAAGTGGGCC ACGGCAAGCT CGCCTGGCGC GCCATCCACC CGCTGCTGCC CGGCAAGGAC
AAGTTCCCCT ACACGCTGCG CGTCGTCTCC GAGATCACCG AAAGCAACGG CTCCTCCTCG
ATGGCGACGG TGTGCGGCAC CTCGCTCGCG CTGATGGATG CCGGCGTGCC GCTGCCGCGC
CCGGTGGCCG GCATCGCCAT GGGCCTGATC AAGGAGGACA AGGGCTTCGC CGTGCTCTCC
GACATCCTCG GCGATGAGGA CCATCTCGGC GACATGGACT TCAAGGTGGC CGGCACCGAA
GCGGGCGTCA CCAGCCTGCA GATGGACATC AAGATCACCT CGATCACGCC CGAGATCATG
AAGATCGCGC TGGATCAGGC GAAGGACGGC CGTCTGCACA TTCTCGGCGA GATGTCCAAG
GCGCTGACCG GCGCGCGCGA GGGCGTGTCC GCCAACGCGC CGCGCATCAC CGTGATCAAC
GTGCCGAAGG ACAAGATCCG CGACGTGATC GGCACCGGCG GCAAGGTGAT CCGCGAGATC
GTCGAGTATT CCGGCTGCAA GATCGACATC GAGGACGATG GCACGATCAA GATCGCGGCC
ACCTCGGACG AGCAGGCGCA GAAGGCGATC GACCGTATCC GCTCGCTGAC CTCCGAGCCG
GAAGTCGGCC AGATCTACAC CGGCAAGGTC GTGAAGATCG CCGATTTCGG CGCCTTCGTG
AACTTCTTCG GCGCGCGTGA CGGCCTGGTC CATATCAGCG AGCTGGCGCA GGGCCGCGTC
GCCCGCACCG GCGATGTGGT CAAGGTCGGC GACACCGTGA AGGTGAAGAT GATCGGGCTC
GACGATCGCG GCAAGGTGAA GCTGTCGATG CGGGTGGTCG ATCAGGCGAC CGGTGCCGAC
ATCTCCGACC AGGTCGGCGC CAAGGGCGGC CGGCGCGAAG ACGCCGCCGA GTAA
|
|---|
| Protein sequence | MMFDKYFRKE LDWGGRKLIL ETGKVARQAD GAVVASYGDT VVLATVVGAR SVKPGQDFFP
LTVNYQEKFY AAGRIPGGFF KREGRPTERE TLTSRLIDRP IRPLFPHGFR NEVQVIVNVL
SHDLENEPDI VSLVAASAAL TLSGIPFFGP VGAARIGYID GEYILNPTSA QIAESRLDLV
LAGTEEGVLM VESEAHELSE ETMLGAVTFG HAAFQPVIQA IIELAEHAAK DPWPLVEESD
EEKALAARVD ELAREGLRAA YAEREKTARH EKIGAVKAAV LETLAAEERS VEKAKGMFKE
LEADIVRNAI LDNGIRIDGR DTRTVRPILA EVGVLPRTHG SALFTRGETQ ALVVATLGTA
QDEQIVDAIE GEYRERFLLH YNFPPFSVGE TGRVGSPGRR EVGHGKLAWR AIHPLLPGKD
KFPYTLRVVS EITESNGSSS MATVCGTSLA LMDAGVPLPR PVAGIAMGLI KEDKGFAVLS
DILGDEDHLG DMDFKVAGTE AGVTSLQMDI KITSITPEIM KIALDQAKDG RLHILGEMSK
ALTGAREGVS ANAPRITVIN VPKDKIRDVI GTGGKVIREI VEYSGCKIDI EDDGTIKIAA
TSDEQAQKAI DRIRSLTSEP EVGQIYTGKV VKIADFGAFV NFFGARDGLV HISELAQGRV
ARTGDVVKVG DTVKVKMIGL DDRGKVKLSM RVVDQATGAD ISDQVGAKGG RREDAAE
|
|---|
| |