| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0337 |
|---|
| Symbol | |
|---|
| ID | 5159805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 385770 |
|---|
| End bp | 387566 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640552255 |
|---|
| Product | nickel-dependent hydrogenase, large subunit |
|---|
| Protein accession | YP_001233483 |
|---|
| Protein GI | 148259356 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0168031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCG TCAGCACGCC GAACGGCTTC ACGCTCGATG CGGGCGGCAA GCGCATGGTG
GTCGATCCGG TGACGCGGAT CGAGGGGCAC ATGCGCTGCG AGGTGAATCT CGACGAGAAC
AACGTGATCC GCAACGCGGT CTCCTCGGGG ACGATGTGGC GCGGGCTGGA GGTGATCCTG
AAGGGGCGCG ACCCGCGGGA TGCCTGGGCG TTCTGCGAGC GGATCTGCGG CGTGTGCACC
GGGGTGCATG CGCTCGCCTC GGTGCGGACG GTGGAGGACG CGCTGGGAAT CCGGATTCCG
GCCAACGCCA ACACGATCCG CAACCTGATC ACCGCCTCGC TCTGGGCGCA GGATCATCTC
GTGCATTTCT ACCACCTGCA CGCGCTGGAC TGGGTGGACG TGGTGAGCGC GCTGAAGGCC
GACCCGAAGG CGACGAGCGC GCTGGCGCAG TCGATCTCGC CGTGGCCGAA TTCCTCGCCG
GGCTATTTCC GCGACGTGCA GACGCGGTTG CAGAAATTCG TGGACTCGGG CCAGCTCGGG
CCGTTCATGA ACGGCTACTG GGGCAACCCG GCCTACAAGC TGCCGCCCGA GGCGAACCTG
ATGGCGGTGT CGCACTATCT GGAGGCGCTC GATTTCCAGC GCGAGATCGT CAAGATCCAT
ACCGTGTTCG GCGGCAAGAA CCCGCATCCG AACTGGCTGG TCGGCGGGAT GGCCTGCGCG
ATCAATCTCG ACGGTCCGCT CGCCGCCGGC GCGCCGGTGA ACATGGTGCA GCTCAATCTG
GTGTCGTCGA TCATCGACCA GACCATCGCG TTCATCGACC AGGTCTATAT TCCGGACCTG
AAGGCCATCG CCTCGTTCTA CAAGACCTGG CAGTACGGGC GCGGGCTGGC GGGGCGCAAC
GTGATGTCGT ACGGCGAGTT CCCGTTCGAG GCGAACGCGT GGACGGACCG GAACCTGATG
ATTCCGCGCG GCGCGATCGT CAACGGCAAC CTCGCCGAAA TTCACGAGGT GGATGCGCGC
GACCCGGGGC AGATCCAGGA ATTCGTCGAT CATTCCTGGT ACAAATACCC GAACGAGTCC
GTGGGCCTGC ACCCGTGGTC GGGGATCACC GATCCGGATT TCCGGCTCGG GGCCAAGACC
GTCGGCACCA GGACGGATAT CCGCCAGCTC GATGAATCGG AGAAATACTC CTTCATCAAG
GCGCCGCGCT GGCGCGGCCA TGCGATGGAG GTGGGGCCGC TTTCGCGCTT CACCATCGGC
TATGCCAGGG GGATGGCGGA ATTCAAGGAG CCGGTCGACC GGCTGCTGAA GGATCTCGGC
CTGCCCTTCG AGGCGCTGTT CACCACACTC GGCCGCACCG CCGCGCGGGG GCTGGAAGCC
TCGTGGGCGG CGCATGCGAT GCGCCGGCTG CACGACCAGC TGATGGACAA TCTCAAGGCC
GGCGATCTCG CCACCGCGAG CACGGCGAAA TGGGAGCCGG CGAGCTGGCC GGCGGAGGCG
AAGGGCGTGG GGCTGGTGGA GGCGCCGCGC GGGGCGCTCG GGCACTGGAT TCATATCCGC
AACGGAAAAA TCGAGGCCTA TCAGGCGGTG GTGCCGACGA CGTGGAACGG CTCGCCGCGC
GACCCGGCCG GCAATATCGG CGCCTTCGAG GCGGCGCTGC TCAACACGCC GCTCGCCAAT
GCCGAGCAGC CGCTGGAGAT CCTGCGCACG CTGCACAGTT TCGATCCGTG CCTCGCCTGC
TCGACGCATG TGATGGCGCC GGATGGCGGC GAGCTGGTGC GCGTGCAGGT GCTCTGA
|
|---|
| Protein sequence | MTSVSTPNGF TLDAGGKRMV VDPVTRIEGH MRCEVNLDEN NVIRNAVSSG TMWRGLEVIL
KGRDPRDAWA FCERICGVCT GVHALASVRT VEDALGIRIP ANANTIRNLI TASLWAQDHL
VHFYHLHALD WVDVVSALKA DPKATSALAQ SISPWPNSSP GYFRDVQTRL QKFVDSGQLG
PFMNGYWGNP AYKLPPEANL MAVSHYLEAL DFQREIVKIH TVFGGKNPHP NWLVGGMACA
INLDGPLAAG APVNMVQLNL VSSIIDQTIA FIDQVYIPDL KAIASFYKTW QYGRGLAGRN
VMSYGEFPFE ANAWTDRNLM IPRGAIVNGN LAEIHEVDAR DPGQIQEFVD HSWYKYPNES
VGLHPWSGIT DPDFRLGAKT VGTRTDIRQL DESEKYSFIK APRWRGHAME VGPLSRFTIG
YARGMAEFKE PVDRLLKDLG LPFEALFTTL GRTAARGLEA SWAAHAMRRL HDQLMDNLKA
GDLATASTAK WEPASWPAEA KGVGLVEAPR GALGHWIHIR NGKIEAYQAV VPTTWNGSPR
DPAGNIGAFE AALLNTPLAN AEQPLEILRT LHSFDPCLAC STHVMAPDGG ELVRVQVL
|
|---|
| |