Gene Acry_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0328 
Symbol 
ID5159741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp378503 
End bp380767 
Gene Length2265 bp 
Protein Length754 aa 
Translation table11 
GC content77% 
IMG OID640552246 
Product(NiFe) hydrogenase maturation protein HypF 
Protein accessionYP_001233474 
Protein GI148259347 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0068] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein
[TIGR00143] [NiFe] hydrogenase maturation protein HypF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCCT TGCGGATCGA ACTCGGCGGG CGGGTGCAGG GGGTCGGGTT CCGCCCCTTC 
GTCTACCGCC TCGCCCGGCG CCACGGCGTC TCCGGCTGGG TCCGCAACGG GCTCGGCACG
GTGGAAATCC TCGCCGCCGC CGACCCCGCG ATCCTCGACC GCTTCACCGC CGCCCTGCTG
GCCGAGGCGC CGCCCACCGC CCGGCCCGGC CTGCTCGGCG TCACCCCGGT GGCCGAGGCG
GTCGAACCCG GATTTTCCAT CCGCGACAGC GCCGCCACCG AAGGCGCGCG TCCCGCGTTC
CCGCCCGATC TCGCCCCCTG TCCCGACTGC CTGCGCGAAC TCGCCGACCG GTCCGACCGC
CGCGCCGGCT ACCCGTTCAT CAACTGCACC CAGTGCGGCC CGCGCTACAG CCTGATCCGC
CGTCTGCCCT ACGACCGCGC CAACACCGCG ATGGCCGGCT TCCCGCTCTG CCCCGCCTGC
CGCGCCGAAT ACGCCGACCC GCTGAACCGC CGCTTCCACG CCGAGCCGGT CGCCTGCCCC
GATTGCGGCC CGTACTGCCG GTTCGAGGCC GCCGGCGCCC CGTCCGCCGC CGGCGAGGCC
GCGCTCGCCG CCGGCCTCGC CGCCCTGCGT CGCGGCCTGA TCGTCGCGGT GCGCGGCGTC
GGCGGCTATC ACCTGCTCTG CGACGCGGCG GACCAAGCCG CCGTCGCCGC CCTGCGCCAC
CGCAAGAGCC GGCCGGACAA GCCCTTCGCC GTGCTGTTCC CCGACGATGC GCGCACCCTC
GATTCCTGCG TCGCCGCCGA TGCCGCCGCG CGCGCCGCGC TGCGCGGCCC GGCCCGGCCC
ATCCTCCTGC TGCCCCGACG CCCCGGCGCG CCGCTGGCGC CCGCGATCGC GCCCGGCTTC
GGCACCATCG GCGCCATGCT GGCCGACAGC CCGCTGCACC ATCTGCTGGC CGAGGGCTTC
GGCGCGCCCC TCGTCGCCAC CTCCGCCAAC CGCTCCGGCG AGCCGATGCT GACCGACCCG
GACGCCGCCG CCGCCGCGCT CGCCGGCATC GCCGACGCCT TCCTCCATCA CGACCGCCCG
ATCGAGCGCC CGGTCGATGA CAGCGTGCTG CGGATCATCG ACGGCGCGCC CCGCATCCTC
CGCGCCGGGC GCGGCCTCTG CCCGATCGAG CGCACCCTGC CGTTCCGCCT CGCCGAGCCG
GTGCTGGCCC TGGGCGGCCA CATGAAATCG ACCATCGCCC TCGGCTTCGC CGACCGGGTG
GTGATCTCGC CGCATCTCGG CGATCTCGAC GATCCCGCGG CCCTCGCCGG CCTCGCCCGC
ATGGCGGCCG ACCTGCAATC CCTCTACGGA ATCGCCCCGC GCCGCCTGCT GGTCGATGCC
CATCCCGGCT ATGCCAGCAC CCGCTGGGCC CGCGCCGAGG CCCGCGCGCG CGGGCTCGAC
ATCGTCCCGG TCTGGCACCA CCACGCCCAT GCCTCGGCCC TGGCCGGCGA GATGGCGCCC
GGAGCGGCGC CGCTCCTCGT CCTCACCTGG GATGGCGTCG GCCTCGGCCC GGACGGCACG
CTCTGGGGCG GCGAGGCGCT GCTCGGCCGC CCCGGCGCCT GGCGCCGCGT CGCCCGCTTC
CGCCCGTTCC GCCTGCAAGG CGGCGACGCC GCCTCCCGCG CCCCCTGGCG CAGCGCCGCC
GCGCTCTGCT GGGCGGCGGG GATCGACCCG CCCGCCGGCC TCCTGCCCGA ACAGGGTGCC
GGCATCGCCC GCGCCGCCTG GGCGCGCGAT CTCAACTGCC ATCGCACCGG CGCCGCCGGA
AGGCTGTTCG ATGCCGCCGC CGCCCTGCTC GGCCTCTGCC GTGTCGCCAG CTTCGAAGGG
CAGGGGCCGG CCCTGCTCGA ATCCCTGGCC GACACCGCGG ACGACATCAC CGGCCCCGCG
CCCGGACTCC CCCTCGCCGA CGCCGCGGAC GGCGTGATCG AGGCCGACTG GTCCGCCGCC
CTGCCGGCGC TGCTCGATGC GTCGGTCCCC GCCGCCCGCC GCGCCGCCGC CTTCCACGCC
ACGATGGCGG CGACCGCGCT GGCCATCGCG GAGACCGTCC GCCGCCGCCA CGGCGTCGCC
GCCATCGGCC TCGCCGGCGG CGTCTTCCAG AACCGGAACC TGGTCGAGCG CCTCGCCCCC
GCCCTGCGCG CCGCCGGCTT CGCAACCCTG TTCGGCGAGG CGATCGCCTG CAACGATGCC
GGGCTCAGCT TCGGCCAGAT CATCGAATAC GGAGGACGCG CGTGA
 
Protein sequence
MPALRIELGG RVQGVGFRPF VYRLARRHGV SGWVRNGLGT VEILAAADPA ILDRFTAALL 
AEAPPTARPG LLGVTPVAEA VEPGFSIRDS AATEGARPAF PPDLAPCPDC LRELADRSDR
RAGYPFINCT QCGPRYSLIR RLPYDRANTA MAGFPLCPAC RAEYADPLNR RFHAEPVACP
DCGPYCRFEA AGAPSAAGEA ALAAGLAALR RGLIVAVRGV GGYHLLCDAA DQAAVAALRH
RKSRPDKPFA VLFPDDARTL DSCVAADAAA RAALRGPARP ILLLPRRPGA PLAPAIAPGF
GTIGAMLADS PLHHLLAEGF GAPLVATSAN RSGEPMLTDP DAAAAALAGI ADAFLHHDRP
IERPVDDSVL RIIDGAPRIL RAGRGLCPIE RTLPFRLAEP VLALGGHMKS TIALGFADRV
VISPHLGDLD DPAALAGLAR MAADLQSLYG IAPRRLLVDA HPGYASTRWA RAEARARGLD
IVPVWHHHAH ASALAGEMAP GAAPLLVLTW DGVGLGPDGT LWGGEALLGR PGAWRRVARF
RPFRLQGGDA ASRAPWRSAA ALCWAAGIDP PAGLLPEQGA GIARAAWARD LNCHRTGAAG
RLFDAAAALL GLCRVASFEG QGPALLESLA DTADDITGPA PGLPLADAAD GVIEADWSAA
LPALLDASVP AARRAAAFHA TMAATALAIA ETVRRRHGVA AIGLAGGVFQ NRNLVERLAP
ALRAAGFATL FGEAIACNDA GLSFGQIIEY GGRA