| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0307 |
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| Symbol | |
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| ID | 5159621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 355316 |
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| End bp | 356557 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640552225 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001233453 |
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| Protein GI | 148259326 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0899354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTCT CACCGAACCC GCCAGCGAAC ACGCAGCGCC CACCGCCTTC CGCGCCGCCG
GAACCGGCAG CCGCGCCGCG CCGCCGGCGC GTCCGGCGCG GCGCCGTGCT GGCGGCGCTG
GCGGTGGGGG TGGCGGCGGC GATCGCGATC GGCTGGCGGA CGGTGGGGGC GCCGCCGCCG
GTTCACTACG TGACGGCGAA GGTCGGGCGC GGCGACATTA CGCGGGCGGT GACGGCGACG
GGGACGGTCA ACCCGATCCT GACGGTGATC GTCGGCTCGG CGGTGTCCGG CATCATCCAG
GACATCAGCT GCGACTACAA CACGATCGTG AAGCTCGGGC AGATCTGCGC CCGGATCGAC
CCGCGGCCCT ACCAGGCGGT GGTGGACCAG GACCGGGCGG CGGTGGCCGT GGACCAGGCG
CAGCTGCGCA AGGACGAGGC GAGCCTCGAC TATGCGCGCG GCAATTACCG CCGCCTCGCC
TCGCTGGTGC CGCAGCGCTA CGCCTCGGAG AACGCCGCCG ACAGCGCGAA GGCGACGTAT
CGGCAACTGG AGGCGCAGAC CGCGCTCGAC CGCGCGGTGA TCCGGCAGGA CGAGGCGAAG
CTCGCCGCCG CGCAGGCCAA TCTCGGCTAT ACCGACATCG TCTCGCCGGT GAACGGGATC
GTCGTCTCGC GCAATGTCAC GATCGGGCAG ACCGTCGCCG CCTCGTTCCA GACGCCGACG
CTGTTCCTGA TCGCCACCGA CCTGACGCGG ATGCAGGTGG ATACCAATGT CAGCGAGGGG
GATATCGCGG ATATCCGCAA GGGCGAGGCG GCGCGGTTCA CCGTTCTCGC CTTTCCGGGC
GAGACGTTCG ACGGCACGGT GACGCAGGTG CGCCAGTCGC CGCAGACGGT GCAGAACGTG
GTGACCTACG ACGTCGTCAT CGAGGTGGAC AACCGCGACC TGAAGCTGAA GCCGGGCATG
ACCGCGTCGG TGCGGATCAT CACCGCGGCG CGGGCCGGCG TGCTGCGCGT GCCGGACCAG
GCGCTGCGCT TCACGCCGCG CCTGGCGAAG GCGGCGCCGG CGGGGGGCGG GGCGCGCGTG
TGGGTGCTGC GGCAGGGCAA GCCGGCCGCC GTTCCGGTGG TCACGGGGCT CGATGACGAC
ACCAATACGG AGATCGTGAG CGGCGGACTG CGCGACGGCG ACGAGGTGAT CACCGGCGAG
CGGCGGGCGC GGGCGGCGAC GCCCTTCGTG CCGCGGTTCT GA
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| Protein sequence | MTVSPNPPAN TQRPPPSAPP EPAAAPRRRR VRRGAVLAAL AVGVAAAIAI GWRTVGAPPP
VHYVTAKVGR GDITRAVTAT GTVNPILTVI VGSAVSGIIQ DISCDYNTIV KLGQICARID
PRPYQAVVDQ DRAAVAVDQA QLRKDEASLD YARGNYRRLA SLVPQRYASE NAADSAKATY
RQLEAQTALD RAVIRQDEAK LAAAQANLGY TDIVSPVNGI VVSRNVTIGQ TVAASFQTPT
LFLIATDLTR MQVDTNVSEG DIADIRKGEA ARFTVLAFPG ETFDGTVTQV RQSPQTVQNV
VTYDVVIEVD NRDLKLKPGM TASVRIITAA RAGVLRVPDQ ALRFTPRLAK AAPAGGGARV
WVLRQGKPAA VPVVTGLDDD TNTEIVSGGL RDGDEVITGE RRARAATPFV PRF
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