| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0301 |
|---|
| Symbol | |
|---|
| ID | 5159873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 347592 |
|---|
| End bp | 349955 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640552219 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001233447 |
|---|
| Protein GI | 148259320 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAGCC TCGACCGCAA GCTGCTGCGC GATCTGTGGC GGCTGCGCCT GCAGGCGCTG
GCGATCGCGC TGGTGATCGC CTCCGGCGTC GCGCTGATGG TGATGGCGCT GACCACGACC
GAATCGCTGG AGGCGACGAC CAGCGCCTAT TACGAGCGCG CGCGCTTCGC CGATGTGTTC
GCCCGGCTGA AGCGCGCGCC GGACTCGCTG GAGGCGCGGA TCGCCGCGAT TCCGGGCGTG
CGGGTGGTGG AGACGCGAAT CGTCGAGTCC GGTCTGCTGG ATGTCGCGGG GTATCGCGAG
CCGGTGGTGG CGACTCTGGT CTCGCTGCCG AAATCCGGCC CGCAGCGGCT CAACGCGCTG
GTCCTGCGCG CGGGCCGGCT GCCGGCGCCT GGCCGGCTGC GCGAGGCGGT GGTCGGCGAA
CCCTTCGCCG AGGCGCATCA CCTGCGGCCG GGCGATACGA TCGGCGCGGT GCTGCGCGGC
CGGCGCGTGG CGCTGCGCAT CGTCGGCACC GCGCTCAGCC CGGAATTCGT CTATGCGATT
CCGCCCGGCG GGCTGATGCC GGATGACCGG CGGTTCGGCG TGATCTGGAT GGGGCGCGAC
GAGCTTGCCG CCGCCTTCGG CCTGAAGGGC GCGTTCGACG ATGTCTCGCT CGCGCTCTCT
CCCGGCCAGC GCCCGCAGCC GGTGATCGCC CGGCTCGACG CGCTGCTCGC CCGTTATGGC
GGCACCGGCG CCTATGACCG CGCCGAACAG GTCTCGAACT GGTTCCTGAG CAACGAGATC
GCGCAGCAGA AGAACATGTC GCGGCTGATG CCGGCGATCT TTCTCGGCGT CGCCGCCTTC
CTCACCAACA TGGTGATGGC GCGGCTGGTC GCGACCGAGC GGCGGGAGAT CGGCCTGCTC
AAGGCGTTCG GCTATGGCGG CGGGGCGATC TTCTGGCATT ACGCGAAGCT GGTGCTCGCC
ATCGCCGCCG GCGGCATCGT GCTGGGCGCG GTGCTCGGCG CCGCGCTCGG CAACTGGAAC
ACCAGGCTCT ATCGCGAGTT CTTCCGCTTT CCGTTCCTGC TCTACCAGCC GGGGCCACGG
AGTTTCGCGA TCGCCGCCGC GGTGAGCCTG GCCACCTCGC TCGCCGGCGG CATGGGGGCG
GTGGGCCGCG CCGCGCGGCT GCCGCCGGCG ATCGCGATGC AGCCGGCGCC GCCGGCGGTC
TATCGGCGGT CTCGCCTCGG CCCGGCGGCG CTGGGGCGGT TCCTCGACGG GCCGAGCCGG
ATGATCGTCC GCCGCCTGCT GCGCTGGCCG CTGCGCGCCT TCCTGGCGAG CGCCGGCCTC
GCGCTCTCGG TCGGCGTGCT GATCCTCGCG CTGCAATGGG TCGATGCGGT GAACGCGCTG
GTCGAGACGC ATTACGAGCG CGGCCAGCGG CAGGACGCGA CGATCACCTT CAACGACCTG
CGGCCGCGCG GCGTTCTCGA CGATATCCGG CATCTGCCGG GCGTGCTGGC GGCGGAGCCG
TTCCGCATCG TGCCGGCGCG GCTCGCGCGC GGCCGGGCCG AACAGCGCGA ACCGGTGATC
GGCGTGCCGG CCGGCGCGCG CCTCGCCCCG GTGCACGACG TGGCGCGGGG GCCGATCGAC
ATGCCGGCGG ACGGGCTGGT GCTGTCGCGC CAGCTGGCGG GGCTGCTGCA TGCCGGCATC
GGCGATCCGG TCCGCGTGCA GTTGCTCGAA GGGCGGCGCG CGGTGCTGAT GGTTCCGGTC
GTCCGGCTGT TCGACACCTA TATCGGCAAG CCGGCCTACA TGAACCTTGC CGCGCTCAAC
CGGCGGATGG GCGATGGCAG CGTGCTGTCC GGCGTTCATG TCACGCTCGA TGAACCACGG
CGCGCGGCGT TTCTCGCCCG GCTGCGGACC CTGCCGGGGA TTGCCGCGAT CCAGTTCCGC
CGGGCGGCGA TCGACACGTT CCACCGGACG ATGGGCGAGA CCATCGACAT CTTCCTTGGT
TTCTTCATCG GGTTCGCCTC GGCGCTGTCG GTCGGGGTGA TCGTCAACGC GATCCGCATC
GCGCTGTCGG AGCGCGAGCG CGAACTGGCG ACGCTGCGGG TGCTCGGCTT CAGCCGCGCC
GAGGTGGCCT ATATCCTGCT CGGCGAGATC GAGCTGCTGG TCTGGATCGC CATTCCGCTC
GGCTGCGGGG CGGGGACGCT GCTCGCCTGG TATTTCGGCA AGGCGTTCGA GACCGAGCTG
TTCCGGGTGC CGCCGGTGAT CTACCCGTCG ACCTACGGCA CCGCGGCGCT GATCATGATC
GCGACGGCGG CGATTGTCGC CGCCTGGCTG CGGCGGCACC TCGACCGGCT GGACATGATC
GCCGTGCTGA AGACGCGGGA GTAG
|
|---|
| Protein sequence | MSSLDRKLLR DLWRLRLQAL AIALVIASGV ALMVMALTTT ESLEATTSAY YERARFADVF
ARLKRAPDSL EARIAAIPGV RVVETRIVES GLLDVAGYRE PVVATLVSLP KSGPQRLNAL
VLRAGRLPAP GRLREAVVGE PFAEAHHLRP GDTIGAVLRG RRVALRIVGT ALSPEFVYAI
PPGGLMPDDR RFGVIWMGRD ELAAAFGLKG AFDDVSLALS PGQRPQPVIA RLDALLARYG
GTGAYDRAEQ VSNWFLSNEI AQQKNMSRLM PAIFLGVAAF LTNMVMARLV ATERREIGLL
KAFGYGGGAI FWHYAKLVLA IAAGGIVLGA VLGAALGNWN TRLYREFFRF PFLLYQPGPR
SFAIAAAVSL ATSLAGGMGA VGRAARLPPA IAMQPAPPAV YRRSRLGPAA LGRFLDGPSR
MIVRRLLRWP LRAFLASAGL ALSVGVLILA LQWVDAVNAL VETHYERGQR QDATITFNDL
RPRGVLDDIR HLPGVLAAEP FRIVPARLAR GRAEQREPVI GVPAGARLAP VHDVARGPID
MPADGLVLSR QLAGLLHAGI GDPVRVQLLE GRRAVLMVPV VRLFDTYIGK PAYMNLAALN
RRMGDGSVLS GVHVTLDEPR RAAFLARLRT LPGIAAIQFR RAAIDTFHRT MGETIDIFLG
FFIGFASALS VGVIVNAIRI ALSERERELA TLRVLGFSRA EVAYILLGEI ELLVWIAIPL
GCGAGTLLAW YFGKAFETEL FRVPPVIYPS TYGTAALIMI ATAAIVAAWL RRHLDRLDMI
AVLKTRE
|
|---|
| |