| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0254 |
|---|
| Symbol | |
|---|
| ID | 5160811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 291181 |
|---|
| End bp | 292884 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640552171 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001233401 |
|---|
| Protein GI | 148259274 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR03205] dicarboxylate--CoA ligase PimA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0249162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC GGCCGTTCCC GTGGGAGCGG AATTATCCGC CCGGTCTGGG CTGGGACATC
GACATCCCGG CCGAGACGAT CCCGGCCATG ATCGCGCGCA GCGTTGCCGA AAACGCGGCG
CTGCCCGCGC TGGAATATCG CGACCGTGAA ACCGGCTTCG CCGAGCTCGG CGAAGCCATC
GGCGAGGTTG CCGCAGGGCT CGCATCGCTC GGCCATGCGA AGGGCGAGCG CATCGCGCTT
TATCTGCCGA ACGTGCCGGC GCACCCGTTC TGCTTCTACG GCGCGCTGAC GGCGGGGCTC
GTCGTCGCGC ATCTCTCGCC GCTGGATGCG GAGCGCGAGC TTGCTCACAA GCTGCACGAT
TCCGGCGCAC GCACGCTGGT GACGACCAAT CTCGGCGCGA TGCTCGGCAT GGCGCTGAAA
CTGCTCGATG CCGGGCATGT GGAGCGCATC ATCGTCGCCG ACGACGCGGC GTTCGGCGAG
ATCCCCGGCA TGGCGCACCC GCCGATCCCG ACGGGCGATC CGCGGGTGAT GACGCTCGAT
GCCCTGCGCG CGCGGGGACG GGCATTCGCG TTCGAGCCGC CCGCCATCGC GCCGGACGAT
CTGGCGCTGC TGCAATATAC CGGCGGCACC ACCGGCCTGC CCAAGGGGGC GATGCACACG
CACGCGACGC TGCGGGCGGC GGTCGCGATC TACGCCACCT TCTTCGACGG CCAGAACCGC
TTCCCGCCGG GGCAGAAATT CCGCGCGATC TGCGTGCTGC CGCTGTTCCA CATCTACGCG
CTGGTCGTGC TCTGCCTGTT GCAGCTCTCG CGCGGATCGA CGCTGCTGCT GCGGCTGAAA
TTCGATGCCG AGACCACGCT GCGCGACATC GAGGTGAAGA AGGCGAGCTA TTTTCCCGGT
GTGCCGACGA TGTGGATCGC GCTCGCCAAC GTGCCGGATC TCGACCGGCG GGACCTGTCG
TCGCTTCGCC TCGTCGGCTC GGGCGGCGCG CCGCTGCCGG TGGAAATCGG GCAACGTTTC
GAGCGGCTGA CCGGCATGCG CCTCGGCGGC GGCTGGGGCA TGACCGAAAC CGCCTCGGCC
GGCACCGGCA ACCTGCTCGA CGGGCTGTTC AAGTTCGGCT CCGCCGGCAT GCCACTGCCC
GGCATCAAGC TCGACGTCGT CGCCCTCGAC GATCCGTCCC GCGTGCTGCC CTATGGCGAA
ACCGGCGAAA TCCGCATCCG CTCGCCCAAC ACCTTCATCG GCTACTGGCA GAACCCCGAG
GAAACCGCCC GCAGTTTCGT CGACGGCCAT TTCCTGACCG GCGATGTCGG CTATATCGAC
GAGGACGGCA TGGTCTTCCT CGTCGATCGC AAGAAGGACA TGATCCTCTC GGGCGGCTTC
AACGTCTACC CGACCGTGAT CGAGAGCGCG ATCTACGAAC ACCCCGACGT CGCCGAGGTC
ATCGTCGTCG GCGTGCCGGA CGACTATCGC GGCCAGTCGG CCAAGGCCTT CATAACGCTG
AAGCCGGGTG CGGCGGAATT CACGATCGAG TCGCTGCGCG ACTTCCTCGC CGACAAGCTC
GGCAAGCACG AACTCCCCGC CGCCGTCGAA TTCCGCGAGG CCCTGCCGAA GACATCGGTC
GGCAAGTTCT CGCGCAAGGA ACTCGCGGCG GAGGAACGCG AACGGCACGC TTCCGCCAGA
GCTTCAGGTG CTGCGGCACC ATGA
|
|---|
| Protein sequence | MSTRPFPWER NYPPGLGWDI DIPAETIPAM IARSVAENAA LPALEYRDRE TGFAELGEAI
GEVAAGLASL GHAKGERIAL YLPNVPAHPF CFYGALTAGL VVAHLSPLDA ERELAHKLHD
SGARTLVTTN LGAMLGMALK LLDAGHVERI IVADDAAFGE IPGMAHPPIP TGDPRVMTLD
ALRARGRAFA FEPPAIAPDD LALLQYTGGT TGLPKGAMHT HATLRAAVAI YATFFDGQNR
FPPGQKFRAI CVLPLFHIYA LVVLCLLQLS RGSTLLLRLK FDAETTLRDI EVKKASYFPG
VPTMWIALAN VPDLDRRDLS SLRLVGSGGA PLPVEIGQRF ERLTGMRLGG GWGMTETASA
GTGNLLDGLF KFGSAGMPLP GIKLDVVALD DPSRVLPYGE TGEIRIRSPN TFIGYWQNPE
ETARSFVDGH FLTGDVGYID EDGMVFLVDR KKDMILSGGF NVYPTVIESA IYEHPDVAEV
IVVGVPDDYR GQSAKAFITL KPGAAEFTIE SLRDFLADKL GKHELPAAVE FREALPKTSV
GKFSRKELAA EERERHASAR ASGAAAP
|
|---|
| |