Gene Acry_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0195 
Symbol 
ID5161013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp224624 
End bp226021 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content71% 
IMG OID640552111 
Productmajor facilitator transporter 
Protein accessionYP_001233342 
Protein GI148259215 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGGC GCCCTTCCGC CCCTCCCTCG GACAGTCATC TCCTGCACAC GCTGTCGGAG 
CTGAGCTGGA ACCGTTTCCA CACGACGGCG GTGCTGCTGT TCGGCCTCGG CTGGGCGCTG
GATGCGTTCG AGGTGACGCT GATCGGCAAT GTGCTGGGGG CGTTGCGGCA GCATTTCGGG
CTCGGCAGCA ACGCGATGTC GGTGATTCTC GCGGCATGGT TCGTCGGGCT GATGATCGGG
GCTGCGGGGT TTGGCGCGCT GTCCGACCGC CTCGGGCGGC GGCGTGTGTT TCTGGCCAGC
CTCGTTTTGT ATGGCGTGGC GACGCTGGCC ACCGCCTTCG CGCCAAATCT CGCCGCCCTG
CTGGTGCTGC GGCTGCTCGG CGGCATCGGC GTCGGCGCGG AATATTCGGC GATCAACGCC
GCGATCGCCG AGCTGGTGCC GAGCCGCTCG CGCGGGCGGG CGGCGGCGAT CGTGCTGAAT
TTCTGGCCGC TGGGCAGTTT CATCGCCGCC TTGCTGGCCT GGCTGGTGCT GTCTTCCCTG
CCGCCGGATC TGGGCTGGCG GGTTGTGTTT GGCCTGGGCG GCGTAGTCGC CCTTTCGGCA
GCATGGTTCC GCCGGCATCT GCCCGAGAGC CCGCGCTGGC TGATCGATGC CGACCGGGCG
GAGGATGCGC GCGCCATCGT CGCCGGGATC GAGGCGGGGC TGACGACGCT GCCGCCGGCG
TCCGCGGTGC CGGTCGTGCA CCGGATCCGC CGCGAGGCGG GGCAGTTCGG CCGGCTGGTG
CGGCAATATC CGGGCCGGTT GCTGCTGGGG GCGGCGCTCG ATTTCGCCGA GGCCGCGGGA
TATTACGGGT TGTTCGCCTT CCTGCCGATC GTGGTGCTGC CGGTGCTGCA TCTGCCGGCG
GACCGGCTGC CGCTGTTCTA CCTCGCCGGC AGTGTCGGCG CCGCCGTGGG CGGGCTCGCC
GCGGCGTCGC TGCTCGACCG GATCGGGCGG AGCTGGACGG TCGGCGGGTT CTATCTTGCC
ACCGCACTCG GCCTCGTGCT GTTCGCCCTG GTGACCGGGC TCGGTGCCGG GCCGATCATG
CTCGGCTTCG CGCTGGTGAA CCTGCTGGCG ACGGGAAGCT GGATCGCCGC CTATCCGACC
TTCTCGGAGC TGTTCCCGAC CGCGCTGCGG GCGACGGGGA TCGGCGCCTC GGTCGCGGTG
GGGCGGGTGG GCGCGGCGCT CTCGCCCTTC CTGGTCGGCT ATGTCGGCGC GCGCTCGATG
CCGGCGGCAC TCGTCATGCT CGCTGGCTTC TGGGCGCTGG GGGCGGTTGC CATCCTGATC
TGGCGGCTGC GCGGGGGGAT CGAGGCGCGG GGGCTCGCCC TTGAGCAGCT CAGCGCCGCA
TCGGCGCGCG GCGTGTAG
 
Protein sequence
MTRRPSAPPS DSHLLHTLSE LSWNRFHTTA VLLFGLGWAL DAFEVTLIGN VLGALRQHFG 
LGSNAMSVIL AAWFVGLMIG AAGFGALSDR LGRRRVFLAS LVLYGVATLA TAFAPNLAAL
LVLRLLGGIG VGAEYSAINA AIAELVPSRS RGRAAAIVLN FWPLGSFIAA LLAWLVLSSL
PPDLGWRVVF GLGGVVALSA AWFRRHLPES PRWLIDADRA EDARAIVAGI EAGLTTLPPA
SAVPVVHRIR REAGQFGRLV RQYPGRLLLG AALDFAEAAG YYGLFAFLPI VVLPVLHLPA
DRLPLFYLAG SVGAAVGGLA AASLLDRIGR SWTVGGFYLA TALGLVLFAL VTGLGAGPIM
LGFALVNLLA TGSWIAAYPT FSELFPTALR ATGIGASVAV GRVGAALSPF LVGYVGARSM
PAALVMLAGF WALGAVAILI WRLRGGIEAR GLALEQLSAA SARGV