Gene Acry_0165 details

Gene Information

• Locus tag: Acry_0165
• ID: 5160911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 187697
• End bp: 189640
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640552081
• Product: surface antigen (D15)
• Protein accession: YP_001233312
• Protein GI: 148259185
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0729] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACATGC CCCTATCTCC TGAAATGATG GAGGAGCGAC GATTTCGCAG CGTGAAGCGC 
GGCTTTCCGC GTATTCCGCC CGGTTTTGTG CATGTCATGG GGCTTGCCGT CGCCGCCGGC 
GCGCTGGTCC CCGTGCCCAC CGTCCGCGCC GCCGATCCGC AACCCTACGA CGTGACCTTC 
GTCCCCACCG GCGACGCGCC GCTCGACAAG CTGATCCGCC AGAGCTCGAG CCTCGAAACC 
CTGCGCCGCA AGCTCGAGGT CGGTCCCTTC GCGCTGATCG CCCGTGCCCG TGCCGACCGC 
AAGACTTTCC TCACTGTGCT GGAAAGCGAG GGCTACGATT CCGGCAAGGT GACCATCACG 
ATCGACGGCC ATACCCTGTC CGATCCCGCC CTGCCCGACC TGCTGCGCAA GGCGCCGGCC 
AGCCCGCCCG CGCGCGTCCG CGTGGCGATC GCGAAAGGCC CGCTCTACCA TGTCGGCGCG 
GTCAGTACGC CCGGCCTCGC CGATCCCGCC GCCGCCGCCG CACTCGGCGT GAGTCCGGGC 
GAACCCGCCA CCGCAGCCCC CCTCGTCGGC GCTGCCGTCC GGCTGGAAAC GAGGCTGCGC 
AATCTTGGTT ACGCCTTCGC GAAGGTCTCC CCGCCCGTGG CCGAGGCCGA TGACGCGACG 
CACACGCTTT CTGTCACCTA TCCGGTCTCG ATGGGTCCGC GCGTCGATGT CGGCAGCATC 
ACCTTCACCG GCATGCAACG GATGAACGGC CGCTTCATGG CCCGGCACAT CGCGCTCAAG 
CCTGGCCAGC GCTACAGCCA GAAGGCGCTG GACGCCTCGC GCGACCAGTT GCTCGGCCTC 
GGCGTGTTTT CCTCCGTCAC CGCCAGCACG GCCGCCGCGC CGCGTCCCGC CGGCCAGGTG 
CCGGTCACCT TCACGGTGCG CGAGCGCAAG CGCCACACCG TCGCCCTCGG CGCTTCATAT 
TCCTCCGATC TCGGCATCGA TGCCAATGTC TCCTGGACCG ACCGCGACCT GTTCGGCGAG 
GCGCAGAGCC TCACCTTGTC GCTCGGCGCC ACCGGCATCG CCGGCAGCGG CCGCAGCCAG 
ACAGCGACTT TCGGCAAGCA TACTTACGTC GTCGCCCCTG GCTACGATGC GAAGGCGACC 
TACCGCGTGC CCGATTTCAT CCGGCCCGGC CAGTCGCTCG TTGCCACGAT CGAGGCGCTG 
AAACAATACC TGCCCGCCTA CAGCCGCACC GCCTTTCTTG GCAGCGCCGC CATCGCCCAT 
CCGCTCGCCC CGCATCTGAC GCTCGACTAC GGCGCCGGCT TCGTTTTCGA GAAGGTGAAC 
CAGCAGGGAG TCAGCCGTAC CTACCGCCTG CTCCAGCTTC CCGTGACCCT GTCCTACAAC 
ACGGCGAATT CGCTCCTCAA TCCCACACGC GGTGTGAAGC TCGCACTGCA CGTCACCCCA 
ACGCTCGCCC TCGGTGCCGG CGCAAAACCC TTCGTCATCA CCGAACTTAC TGGCAGCACC 
TACATCAATC TCGAAGCTCC CGGCCGCGGC GTGCTGGCGC TGCACGGCGT GCTCGGCCGC 
ATCTTCGGCG CCTCGCAATT CCAGATTCCG CCCGACCAGC GCTTCTACGC CGGCGGCACC 
GGCACCGTGC GCGGCTTCAC CTACCAGACC GTCGGCCCGC TCTTCCCCGA TGGCATTCCC 
GAGGGCGGCA CCGCGATCGA CGCACTGGAG ACCGAATTCC GTCAGCGCAT CGGCAAGCAT 
TTCGGCGTCG CCCCCTTCAT CGATGCCGGC CAGGTCTCGG CCAACGGCAC ACCCTTCACC 
GGCACGCTGC GCGTCGGTGC CGGTCTCGGC CTGCTCTACT ACACCGGCAT CGGCCCGCTG 
CGCGTCGATG TCGGCGTCCC GCTCAACCGC GCACCCGGCA GTTCCTCCTT CGCCGTCTAT 
ATCGGTCTCG GACAGGCCTT CTGA 

 

Protein sequence

MHMPLSPEMM EERRFRSVKR GFPRIPPGFV HVMGLAVAAG ALVPVPTVRA ADPQPYDVTF 
VPTGDAPLDK LIRQSSSLET LRRKLEVGPF ALIARARADR KTFLTVLESE GYDSGKVTIT 
IDGHTLSDPA LPDLLRKAPA SPPARVRVAI AKGPLYHVGA VSTPGLADPA AAAALGVSPG 
EPATAAPLVG AAVRLETRLR NLGYAFAKVS PPVAEADDAT HTLSVTYPVS MGPRVDVGSI 
TFTGMQRMNG RFMARHIALK PGQRYSQKAL DASRDQLLGL GVFSSVTAST AAAPRPAGQV 
PVTFTVRERK RHTVALGASY SSDLGIDANV SWTDRDLFGE AQSLTLSLGA TGIAGSGRSQ 
TATFGKHTYV VAPGYDAKAT YRVPDFIRPG QSLVATIEAL KQYLPAYSRT AFLGSAAIAH 
PLAPHLTLDY GAGFVFEKVN QQGVSRTYRL LQLPVTLSYN TANSLLNPTR GVKLALHVTP 
TLALGAGAKP FVITELTGST YINLEAPGRG VLALHGVLGR IFGASQFQIP PDQRFYAGGT 
GTVRGFTYQT VGPLFPDGIP EGGTAIDALE TEFRQRIGKH FGVAPFIDAG QVSANGTPFT 
GTLRVGAGLG LLYYTGIGPL RVDVGVPLNR APGSSSFAVY IGLGQAF