| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0118 |
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| Symbol | |
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| ID | 5161059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 130596 |
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| End bp | 131468 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640552034 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001233265 |
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| Protein GI | 148259138 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCATTC CCGCCAACGC CGCGCGCTTC GCCGATGACG CCGCAACCGT CGCCGCCGCG
ACGCGCGCCG CCGGCACGTC CTTCTATCGC GGCATGAGTG TTCTCCCTGC GCCGCGCCGC
ACCGCGATGT ATGCAATCTA CACGTTCTGC CGGATCGTGG ACGATATCGC CGACGAAGAG
GCGCCGCTTG CGGCGAAGCG CGAAGGGCTC GATGCCTGGC GCCGGCGGAT CGACGCGCTG
CCCGAAGGCG GTGATGACCC GGTCACCCGC CTGCTGCGCG ATGCCTCGCT GCGCTACGCG
TTGCGGCGGG AGGATTTCCA CGCGATCATC GACGGGATGG AGATGGATGC CGGCGCGCCG
ATCATCGCGC CGGACATGGC CACGCTCGAT CTTTATTGCG ACCGTGTGGC CTCGGCAGTG
GGCCGGCTGT CGATCCGGGT GTTCGGCGAG GTTTCGGCAC AGGGCGACAG GGTGGCACAT
CATCTCGGCC GGGCGTTGCA ACTCACCAAC ATCCTGCGCG ATGTCGGCGA GGATGCGGCG
CGGGGGCGAA TATATCTCCC GCGCGAGGCG CTGGAGGCTG CCGATGCTGC TGCCAATCCG
GCAACGCTGC TGGCCGATCC GGGACTGAAG CGGGCAATGG CCGAGATCGC CGGGCTGGCC
GAGCAACATT TCGCTGAGGC CGCTGCCGCG ATGCGCGGCT GCGACCGCCG CGCCGTGCTG
CCGGCACGAA TGATGGCGGA TGCCTATCGG CCGTTGCTGG GGGTGATGCG CGCGGCGGGT
TTCGCCCATC CCGAGCGCCG GCTCAGCCTG CCAGCCTGGC GCAAGCTGCG CCTTGCCGCC
GAGCTTCTCA TCCGGACTGA CCGGCACCGA TGA
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| Protein sequence | MFIPANAARF ADDAATVAAA TRAAGTSFYR GMSVLPAPRR TAMYAIYTFC RIVDDIADEE
APLAAKREGL DAWRRRIDAL PEGGDDPVTR LLRDASLRYA LRREDFHAII DGMEMDAGAP
IIAPDMATLD LYCDRVASAV GRLSIRVFGE VSAQGDRVAH HLGRALQLTN ILRDVGEDAA
RGRIYLPREA LEAADAAANP ATLLADPGLK RAMAEIAGLA EQHFAEAAAA MRGCDRRAVL
PARMMADAYR PLLGVMRAAG FAHPERRLSL PAWRKLRLAA ELLIRTDRHR
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