| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0116 |
|---|
| Symbol | |
|---|
| ID | 5161069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 127815 |
|---|
| End bp | 129011 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640552032 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001233263 |
|---|
| Protein GI | 148259136 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG CGCGCGTGAA TTCTGCCTTG GTGCGGCGCA TCAATTCGGC GCGGCTGTTC
CACATGATCC GCCAGAATCC AGGCATCTCG CAGCAGAAGC TTTCGCAGAT TTCCGGTATC
GATCCTGCGA CCATTTCGAT CATCATCAAC AATCTTGAAT CGGGCGGCAT TGTTCGGCGC
GACACTGATG CGCCGACCGG CCGAGCCGGG CGGCCAACCA CGGCGCTGAG CCTTGATCCG
CGAGCCGGAT ATCTCGCGGG TATCAGCGTC GAACCGGACG CCATCCGCAT CGTGATCTCG
ACCATCGACG GTACCGCCTG CGCCGATCTC GCGGTGCCCG GCAGCACGGC GCCAGAGGCT
GCAATCGCCG CCGCCCGCAG CGGCGTTACC GCGGCCTTGC GCTCGTTGCG CGCCACGCGT
GCCACGCTTC TTGCCGCGGG AGTCGCCATG CCGGCGCTCG TCTCGACCGG CGGGCGTATC
GTCTTCGCGC CCAATATCGG GTGGCGTGAT CTCGATGTCG CCGAAAATCT CGCCCAGAAA
CTGAAGGTGC CGGTCCGTGT CGAGAACGAC GTGAAGGCGG CAGCCTTGGC GGAGCACCTC
TTCGGAGCAA GCCGCGACAT AGCCGATTTC GTTTACGTGA TGGGTCGTTC GGGCATCGGC
GGCGGGCTCT ATTTGATGGG TGAGCTTTAC CGCGGCCCTC ATGGACTGGC TGGCGAAATC
GGCCACATGA AGATTGTGCC CGGCGGACGT GCCTGTGGTT GCGGTGGTCA GGGCTGCTTC
GAAGCCTATG TATCCGAAAA GGCAATCCTG AGCGATCTCG CCGCCCGAGG CCACGGGGCG
AGAGATGTCG CTTCCGTTCG CAAGGCCTGC GAGGCTGGCG ACCCCGTGGC ACGCGCCGTG
CTCGCCGAGG CCGGGCGTCA TCTCGGGCTC GCCCTGGCGA ACCTGATCAA CATTATCAGT
CCGCGCCGTA TCGTACTCGG CGGCAGCCTC GCGCAGCTCG CGCCGTTCCT GCTGCCCGCG
GCGATGGAGA CGCTGGAAGC CAATGCGCTT GCGGCGATCT ATAGAGATGT CGAGATCGTC
GTCTCCGAGA TGAGCGGCAG TGCGGCGGCG ATGGGCGGCA TAGCCCTCGC GCTCCAGCAA
TTTCTCGATG ATCCGCCGGT TCGCCTCGAT CGCGCGCGCC CCACGCCTTC GCCCTGA
|
|---|
| Protein sequence | MTRARVNSAL VRRINSARLF HMIRQNPGIS QQKLSQISGI DPATISIIIN NLESGGIVRR
DTDAPTGRAG RPTTALSLDP RAGYLAGISV EPDAIRIVIS TIDGTACADL AVPGSTAPEA
AIAAARSGVT AALRSLRATR ATLLAAGVAM PALVSTGGRI VFAPNIGWRD LDVAENLAQK
LKVPVRVEND VKAAALAEHL FGASRDIADF VYVMGRSGIG GGLYLMGELY RGPHGLAGEI
GHMKIVPGGR ACGCGGQGCF EAYVSEKAIL SDLAARGHGA RDVASVRKAC EAGDPVARAV
LAEAGRHLGL ALANLINIIS PRRIVLGGSL AQLAPFLLPA AMETLEANAL AAIYRDVEIV
VSEMSGSAAA MGGIALALQQ FLDDPPVRLD RARPTPSP
|
|---|
| |