Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0093 |
Symbol | |
ID | 5162221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 104218 |
End bp | 104907 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640552010 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001233241 |
Protein GI | 148259114 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.247373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTATTG TCACACGAGT TTGCCGCCGG CGCGACGCCG CAGATGCGGC GCGGCAACGG CGCGATGCGC TGATCGAGAC GGCGGAACGG GTGTTCCTTC GCAAGGGGTA TCATGCCGCG ACGATGGACG ATATTGCCGC GGAGGCCGGC ATGTCGAAGC GAACGCTTTA TCAGCTTGTG GACTCCAAGG AAGACCTGTT CACCGCTCTG CTCGAGCGCC GCCGTCGCCC TCTTGATGTT TCCGGCATTG AGACCGAGGG GCGGCCGGTG GACGACGTAT TGAACGATAT GCTCCGCTTG TGGGCGCACC ACGTGTTGAG CCCGTCGATT ATCGCACTTG CCCGGCTGAT CATGGCGGAA TACATGCATG GCCGGACGCT CTCCCGCCTG CTGGATCGGG AGGGGGCAAA GCCGTGCCGT GATGCGCTGC GGGATTATTT TTCCGCCAGT GCCGCCAGCG GATCCCTCGC CATCGACGAT CCCGAAGAGG CGGCACACAT GCTTTACGGG ATGGCGATCG GTAATATCCA CATCGAAATG CTTTTGGGCA TCGGAAAGGC CCGTAGCCGT GCCGAAATCG ATGCCCGGAT TGCCCGTGCT GTCGGCTTGT TCCTCGGTGG GGCCAGGCCA AGCGGGCGGG TGGGATCAGA CGTGCCCGCG CAGGTCCGCG AAACGATGGC GCAGAGTTGA
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Protein sequence | MGIVTRVCRR RDAADAARQR RDALIETAER VFLRKGYHAA TMDDIAAEAG MSKRTLYQLV DSKEDLFTAL LERRRRPLDV SGIETEGRPV DDVLNDMLRL WAHHVLSPSI IALARLIMAE YMHGRTLSRL LDREGAKPCR DALRDYFSAS AASGSLAIDD PEEAAHMLYG MAIGNIHIEM LLGIGKARSR AEIDARIARA VGLFLGGARP SGRVGSDVPA QVRETMAQS
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