| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0092 |
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| Symbol | |
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| ID | 5162137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 102503 |
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| End bp | 104176 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640552009 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001233240 |
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| Protein GI | 148259113 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.602772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA ATATTAAATC GGCCTCTTTT CGATATCTTG ACGCATCGGC AGAAAACTCT
GTAGTTTCCA CTTGTCCACT GAGGAGGCTC CCGCGTGCAG GCTGGCGGTT CTGTCCGCGT
TCAGTTCAGG CACGCCAGGT ACTGCATATC ATGAACTTTT CCGATATCCT GCTTCATCGC
CGCGTCCGGC TGGCAACGGT TCTGCTCGGC ACCACGCTGC TCGCGGGTTG CGCGGTCGGC
CCGAACTATC ACCAGCCCGC GGCCCCGAAG CTGCATAGCT ACACCACAAG CCGACTGCCC
AACAGCACGG CTTCGACCTC CGGCGCAGGA GGAACTGCGC AGCATCTCGT GATCGGCCAG
AAAATCGCTG GCGAATGGTG GACGCTCTAC CATTCGAAAC CACTTGATAC GCTGATCCGT
AAGGCTCTGG CGAACAATCC GAGCCTGAAA TCGGCCCAGT ACACCCTGCT GGCCGCACGC
GACACCGCCC GAGCAGCCGA AGGCGGGTTT TTCCCTTCAA TCTCTGGAAG TTTCCAGGCC
GAACGAGTGC GCAGCGGACT GGGAACGACG GGCCTCGGCT CTGCCGGCGC CGGCCTCACC
TATTCGCTGC GCAACGCCTC CGTCGCGGTA TCCTATGCGC CCGACGTGTT TGGCGGCACA
CGGAGGCAAG TCGAAAGCCT GCATGCTCAG GCCGAACAGC AGCGATTCGC ACTTGAGGCT
ACCTATCTCT CGCTCACTGC CAACATCGTC ACCGCCTCGG TTACCGAAGC TTCGCTGACC
GCCCAGATCG AGGCGACGGA GCGGATCATC CGCGCGGAGA AAGGACTGCT CGACATTCTC
GACCGTCAGG TGGCGCTTGG AGGCATTCCC GAAACCAACG CGATCACCCA ACGCACCCAG
CTGGCCCAGA CAGAAGCAAC ACTACCGCCT CTGCGCAAGC AGCTCGCGCA GACACGGGAC
CAGCTCGCAG CCTATGAAGG AGTTCCTCCG AGCCGCTTCC ACGCAGCCGA TTTCACCCTG
GCCGATCTCG CGCTGCCGGA AAGCCTGCCG GTGAGCCTCC CCTCCGCGCT GGTACGCCAG
CGCCCAGACA TTCGCGAGGC GGCAGCGGTC TTGCACCAGG ACACGGCGCA GGTCGGCGTC
GCCACCGCGA ACATGCTGCC GCAAATCACC CTTTCCGCCG GCATCGGCCA TGAAGCGCTG
GACGGCCAGG CCCTGTTCGC TCCGCAGACC CTGTTGTGGA ATCTTGCCGC CGGCATCACC
CAGCCCTTCT TCGAGGGTGG CACGCTGTTC TACAAGCGCC GCGCCGCTGT TGCGACCATG
AAGGCAGCTG CCGAGACCTA TGAGAACACG GTCGTACTCG CCTTCCAGAA CGTGGCGGAC
GCACTGGAAG CCCTGCATTA CGACGCCATC GCGCTTGCGG CGGACACTGC GGCCGAGCAC
GACGCGCAGC GCAGCCTCAA TCTCATCGAG CGTCAGTTCC GCCTCGGCGG CGTGCCCTAC
ACCTCGGTGC TGACCGCCGA GCAAACCTAC GAATCGGCCG TCATCACCCG CATCAAGGCC
ACTGCCCAGC GCTATGCCGA TACGGCGGCG CTGTTCCAGG CTCTCGGTGG CGGCTGGTGG
CACCGGCATG ACGTGAAGAA GCAAGTCGAA ACCTGCTGTG GAGTATTGCC ATGA
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| Protein sequence | MNFNIKSASF RYLDASAENS VVSTCPLRRL PRAGWRFCPR SVQARQVLHI MNFSDILLHR
RVRLATVLLG TTLLAGCAVG PNYHQPAAPK LHSYTTSRLP NSTASTSGAG GTAQHLVIGQ
KIAGEWWTLY HSKPLDTLIR KALANNPSLK SAQYTLLAAR DTARAAEGGF FPSISGSFQA
ERVRSGLGTT GLGSAGAGLT YSLRNASVAV SYAPDVFGGT RRQVESLHAQ AEQQRFALEA
TYLSLTANIV TASVTEASLT AQIEATERII RAEKGLLDIL DRQVALGGIP ETNAITQRTQ
LAQTEATLPP LRKQLAQTRD QLAAYEGVPP SRFHAADFTL ADLALPESLP VSLPSALVRQ
RPDIREAAAV LHQDTAQVGV ATANMLPQIT LSAGIGHEAL DGQALFAPQT LLWNLAAGIT
QPFFEGGTLF YKRRAAVATM KAAAETYENT VVLAFQNVAD ALEALHYDAI ALAADTAAEH
DAQRSLNLIE RQFRLGGVPY TSVLTAEQTY ESAVITRIKA TAQRYADTAA LFQALGGGWW
HRHDVKKQVE TCCGVLP
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