| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0079 |
|---|
| Symbol | |
|---|
| ID | 5162239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 86458 |
|---|
| End bp | 87198 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640551995 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
|---|
| Protein accession | YP_001233227 |
|---|
| Protein GI | 148259100 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGC TGATGAGTCC GGACGAACTG GAAGCCGCGC TCCGCGCAGT GGGTGCGGCG
CGGTACCACA ACCGCCATCC GTTCCATCAG CTTCTGCACG GCGGGAAACT GGATAAGCGG
CAGGTTCAGG CTTGGGCGCT CAATCGCTAC TGTTATCAGG CGGCGATTCC GATCAAGGAT
GCCACGCTGA TCGCCCGCAC TGATGATTCC GAGTTGCGCC GGATCTGGCG CCAGCGCCTT
GTCGATCACG ACGGCACGCA ACCGGGAGAG GGCGGCATCG TCCGCTGGCT GGCTCTCGCC
GAGGGGCTGG GACTCGATCG CGACATGGTC ATCAGCGAGC GCCGTGCCCT CCCGGCGACG
CGGTTCGCCG TGCGCGCCTA TGTCGATTTC GTACGCGACC GCTCGTTGCT GGAGGCCGTG
GCGTCGTCGC TGACGGAAAT GTTCTCGCCG ACGATCATTT CCGAGCGCGT TTCCGGCATG
CTTGCCAATT ACGACTTCAT CACGAGGGAA ACGCTGGCCT ACTTCAATGC GCGTCTCGAC
CAGGCGCCGC GCGACGCCGA TTTCGCGCTC GACTACGTCA AGCGCCATGC CCGCACGCCG
GAGCAGCAGC AGGCGGCCAT CGCGGCGCTG ACATTCAAGT GCGATGTGCT CTGGGCGCAA
CTCGACGCGC TGCACCATGC CTATGTCAGC CCGGGGCTGA TCCCGCCGGG GGCGTTCGGC
CATGATGGTA TCTGGTCGTG A
|
|---|
| Protein sequence | MTVLMSPDEL EAALRAVGAA RYHNRHPFHQ LLHGGKLDKR QVQAWALNRY CYQAAIPIKD
ATLIARTDDS ELRRIWRQRL VDHDGTQPGE GGIVRWLALA EGLGLDRDMV ISERRALPAT
RFAVRAYVDF VRDRSLLEAV ASSLTEMFSP TIISERVSGM LANYDFITRE TLAYFNARLD
QAPRDADFAL DYVKRHARTP EQQQAAIAAL TFKCDVLWAQ LDALHHAYVS PGLIPPGAFG
HDGIWS
|
|---|
| |