| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0043 |
|---|
| Symbol | |
|---|
| ID | 5160642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 41089 |
|---|
| End bp | 42816 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640551957 |
|---|
| Product | gluconate 2-dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001233191 |
|---|
| Protein GI | 148259064 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCATT CAAAAAAGAC GATTTTTCGC CGCGCTCCGC TCTGGGCCGC CACACTTCTC
ATTGCATTGA CCTGCGGCGC CGTCGGCATT GAGGCTGCGT TCGGCCAGGA GGCGGGCGGC
TACATGCCGA CGCCGACGGC GGCGAAGCCC GAGGCGTTTC CGGCGCTGCC CGAACCCGTG
ACCAAGGGCA TGAGCCAGGC AGAGATCGCG CAGGTGCGGC GCGGCGAATA TCTCACTGCC
GCAGCGGACT GCATGCCCTG CCACACGGCA CCGGGAGCAA AGCCTTTCTC CGGCGGACTG
TCCTTCGTCA CCCCGTTCGG CACGCTCTAC TCACCCAACA TCACCCCGGC CAAGACGACC
GGCATCGGCA AGTGGACGCC GCGGCAATTC TACAATGCCC TGCATTACGG CGTCTCGCCC
GGCAGTTCGC TGGGCGTGTT TCCGAAATAT CTCTATCCGG CGATGCCCTA CACATCCTAT
GCCAAGCTGA CGAGGCCGGA TGTGATGGCC ATCAAGGCCT ATCTCGACGC CATACCTGCC
GTGCACGCAC CGCATGCACC GAACCGGCTC GGCTTCCCGT TCAACATCCG CGCGATGCTG
CTCGGCTGGC GCATCATGTT CTTCAGCACC GCGCCGGTCC ATTACAAGAA GGACTGGTCG
CCCGCGGTGC GCAACGGCGC CTATCTCGCC GAAGCCCTCG GCCATTGCAG CGAGTGCCAT
TCGCCGCGCA ACCTGCTGTT CGCCATCAAG TCGGGCGATA CGCTGGCCGG CGCGCAGATC
CTCGGCGAGC CCTGGTATGC GCCGAACATA TCCTCCTCGA AGACCTATGG CGTCGGCGGG
TGGAGCCGGA AGGACCTGGT CGACTACCTG CATGAGGGCG GCAACATGAA CCGTGGCTCG
GCATTCGGGC CGATGCAGTC TGTTGTGGAT TACAGCCTGA GCCAGCTCCC GCGGCAGGAT
GTCGACGATC TTGCCGCCTA TCTGCAGACC GCGACGCCGC CGCGCGAGAA CCCGGTGAAG
AAGGTGGCGC TTGCCCCGGG CGAGCTCGCG CAGGGCAAGG CGCTCTACGA TGACAACTGC
GCCGCCTGCC ACCAAGCGGA CGGCAAGGGC GTGAAGGACG TGTTCCCGAA TCTCGCCGGG
AATGACGCGG TGACCAACGG CCCGTCGGAC AACGTGATCG GCATCGTGCT CGGCGGAATG
ATCCCCTGGC ACGCCAACGG CCCGGCCATG CCCGCCTTCG GTTCGATGCT GAACGACGCC
CAAATCGCCG CGATCGCCAA CTACGTGCGC ACCGCCTGGG GTAACAAGGG CGTGACCGAT
GCCGATGCCG CCAAGGTGCT GGGCATCCGC GCATCGACCC CGCCGCACGA CATCGCGCTG
GCCGACGCCG ACTATCTCGA CCTGCCGCCG ATCGCCTCCG CCGCCGCGCG CAGGATGAAC
TGCCCGCTGC TGACGAAGGA CCTCGTCTCG CCCGGCCACG GCACGATGGA GATTATGCAG
GGCGTCACGC CGGCAACGCT CGGCAACCGC ACCCGCATGC TGGTCGCCGC GATCCGCAAG
GCCTATCCGG ACATTACCCA GAAGCGCATG GCGGAATTCC TGACGGCGGC CTATTGCCCG
GTCGTGGCGC AGGAACGCGG CCTGTCGCTC GGGGAGAAGA AGAAGGCGAT CCAGCGCTTC
CTCTCCGAGG CGGCGTCGAT GGACACGGCC GCCAGGAAGG GGAGCTGA
|
|---|
| Protein sequence | MPHSKKTIFR RAPLWAATLL IALTCGAVGI EAAFGQEAGG YMPTPTAAKP EAFPALPEPV
TKGMSQAEIA QVRRGEYLTA AADCMPCHTA PGAKPFSGGL SFVTPFGTLY SPNITPAKTT
GIGKWTPRQF YNALHYGVSP GSSLGVFPKY LYPAMPYTSY AKLTRPDVMA IKAYLDAIPA
VHAPHAPNRL GFPFNIRAML LGWRIMFFST APVHYKKDWS PAVRNGAYLA EALGHCSECH
SPRNLLFAIK SGDTLAGAQI LGEPWYAPNI SSSKTYGVGG WSRKDLVDYL HEGGNMNRGS
AFGPMQSVVD YSLSQLPRQD VDDLAAYLQT ATPPRENPVK KVALAPGELA QGKALYDDNC
AACHQADGKG VKDVFPNLAG NDAVTNGPSD NVIGIVLGGM IPWHANGPAM PAFGSMLNDA
QIAAIANYVR TAWGNKGVTD ADAAKVLGIR ASTPPHDIAL ADADYLDLPP IASAAARRMN
CPLLTKDLVS PGHGTMEIMQ GVTPATLGNR TRMLVAAIRK AYPDITQKRM AEFLTAAYCP
VVAQERGLSL GEKKKAIQRF LSEAASMDTA ARKGS
|
|---|
| |