Gene Acry_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0037 
Symbol 
ID5161235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp34256 
End bp36493 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content71% 
IMG OID640551951 
Productribonuclease R 
Protein accessionYP_001233185 
Protein GI148259058 
COG category[K] Transcription 
COG ID[COG0557] Exoribonuclease R 
TIGRFAM ID[TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGGA AGCCCGTCCG CCGATCCGCC GAACTGCCGA CCGAGGCTGT GCTGCGCGAG 
TTCATCGCCG AAGCTGGAAC CCGGCTGCGC AAGGGCGACA TTGCCCGCGC CTTCGGCCTC
GGCCCCGACC AGAAACCGGC GCTGCGGGCG ATGCTGCGGA ATCTCGAACG CGATGGCATG
CTGGTCCGCG CCGGCGGGCG GCAGGTGCGC GCGGCCGAGG CGCTGCCGGA ACGCTGCGTC
GTCGAGATCA CCGGCACCGA TCGTGACGGC GACCCGCTTG CCCGGCCGGT CGGCTGGGAC
CGGCAGGGCA AGCCGCCGAT CATCTTCATG TTGCCCGAAA AGCGCGGCCA CGCTGCGCTC
GCGCCCGGCG CGCGGGTGCT GGCCCGGCTG CGACGGATCG ACGACGACCG TTACGAAGGC
CGCACGGTCC GGCGGCTCGA CGAGGAGCCG GCCAGCATCA TCGGCGTGTT CCGCGCCGAG
GGAGAGGGCG GCTGGATCGA GCCGGTGGAC CGCAAGAGCC GCGCCGAATG GAAGGTGCCG
CCGGGCGAAA CCGCCGGTGC CGAAAGCGGC GACGTGGTGC GCGCCATGCC CTTGCCGGCC
TTCGGCTACA GGCCGAAGCC GGCGCGGATC GCCGAGCATC TCGGCCGGAT GGGCGATGCG
CGCTCGATCA GCCTGATCGC CATCGCGGCA CTGGGGATTC CGGCCGACTT CCCGGAGACC
GCGATCGACG AGGCGAAGCG CGCCCGCGGC GTCCGCCCCG GCCGGCGGAC CGATCTGCGC
GAAGTGCCGC TGGTGACGAT CGACGGCGCC GATGCGCGCG ACTTCGATGA CGCCGTCTTC
GCCGAACCCG CCGGGCCGGG GCATCGCATC GTCGTCGCCA TCGCCGATGT CGCGCATTAC
GTGCGCCCCG GCTCGGCGCT CGACCGCGAG GCGCTGAAGC GCGGCAACTC GGTCTATTTC
CCCGACCGCG TGGTGCCGAT GCTGCCCGAG GCGCTCTCCA ACGGCTGGTG CAGCCTGCGG
CCGGGCGAGG ACAGGGGATG CCTGTTCGTC GAGATGATCG TCGACGCCGA GGGCCGCAAG
CTGAGCCACC AATTCGGCCG CGGCCTGATG CGCAGCTTCG CCCGCCTCAC CTACGAGGAG
GTGCAGGGCG CCTTCGAGTC CGGCTGGGAA GCCGATCTGC CGGACGGGAC GATCGACCAT
CTCTACGCCG CCTATCGCAC GCTGCTGGCG GCGCGGCAGG CCCGCGGCAC GCTCGATCTC
GACCTGCCGG AGCGCAAGAT CACGCTCGAC GAGGCTGGCC GGGTGACGGA CGTGGCGCCG
CGCCCGCGGC TCGACAGCCA CCGGCTGATC GAGGAGTTCA TGATCCTCGC CAATGTCGCG
GCGGCGGAGG AGCTGGAACG GCTGCGCCAG CCGTGCATGT ATCGCGTGCA CGCCCCGCCC
TCGCCGGAAA AGCTCGATTC GCTGCGCAAT CTGCTGGCGA CGTTCGAGAT TTCGCTCAAG
CCCGGCGACC AGCTCCACCC GCGCGACCTT GATCATGTGC TGCGCCTTGT CGCCGGTAGC
GATGCGGCGC CGCTGGTGAA CGAGGCGGTG CTGCGCAGCC AGAGCCAGGC GGAATACGCG
CCGGAGAATA TCGGCCATTT CGGCCTGGCG CTGAACAGCT ACGCGCATTT CACCTCGCCG
ATCCGCCGCT ATGCCGATCT TCTGGTCCAT CGCGCGCTCA TCGCCGGGCT GAAGCTCGGC
ACCGACGGGC TGCGTCCCGA ACACGCCGAC GGATTCGAAA CCATCGCGGC GGCGATCACC
TCGACCGAGC GCCGCGCCAC CGATGCCGAG CGGCAATCGG CCGACCGCTA TCTTGCCGCC
TATCTGGCCG ACCGGATCGG CGAGGATTTC GGCGCGCGGG TCAGCGGGGT GACGCGGTTC
GGCCTGTTCG TCACGCTCGA TGCGACCGGC GCGTCCGGTT TCGTGCCGAT GGCGCTGCTG
CCCGACGATT TCTGGCATTT CGACGAGGCC GATGGCACGC TGTCCGGCAC CCGCTCGCGC
GTGGTGTTCC GCCTGGCCGA TCCGGTGCTG GTGCGGCTGC GCGAGGCGAA GCCGGTGACC
GGCGGGCTGC TGTTCACCCT GATCGAGGGC GGCAGCGCGC CGGGCGAGGG CGGTGGACAA
CATCGCCGGT TGCCGGCCCG CAAGGGCGGC AGGAAGCCGG GCCGCGCGCC CGCCAGGCAC
AAGCGCAGCC GCCGATGA
 
Protein sequence
MTRKPVRRSA ELPTEAVLRE FIAEAGTRLR KGDIARAFGL GPDQKPALRA MLRNLERDGM 
LVRAGGRQVR AAEALPERCV VEITGTDRDG DPLARPVGWD RQGKPPIIFM LPEKRGHAAL
APGARVLARL RRIDDDRYEG RTVRRLDEEP ASIIGVFRAE GEGGWIEPVD RKSRAEWKVP
PGETAGAESG DVVRAMPLPA FGYRPKPARI AEHLGRMGDA RSISLIAIAA LGIPADFPET
AIDEAKRARG VRPGRRTDLR EVPLVTIDGA DARDFDDAVF AEPAGPGHRI VVAIADVAHY
VRPGSALDRE ALKRGNSVYF PDRVVPMLPE ALSNGWCSLR PGEDRGCLFV EMIVDAEGRK
LSHQFGRGLM RSFARLTYEE VQGAFESGWE ADLPDGTIDH LYAAYRTLLA ARQARGTLDL
DLPERKITLD EAGRVTDVAP RPRLDSHRLI EEFMILANVA AAEELERLRQ PCMYRVHAPP
SPEKLDSLRN LLATFEISLK PGDQLHPRDL DHVLRLVAGS DAAPLVNEAV LRSQSQAEYA
PENIGHFGLA LNSYAHFTSP IRRYADLLVH RALIAGLKLG TDGLRPEHAD GFETIAAAIT
STERRATDAE RQSADRYLAA YLADRIGEDF GARVSGVTRF GLFVTLDATG ASGFVPMALL
PDDFWHFDEA DGTLSGTRSR VVFRLADPVL VRLREAKPVT GGLLFTLIEG GSAPGEGGGQ
HRRLPARKGG RKPGRAPARH KRSRR