Gene Acry_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0001 
SymboldnaA 
ID5160411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp261 
End bp1709 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content65% 
IMG OID640551915 
Productchromosomal replication initiation protein 
Protein accessionYP_001233149 
Protein GI148259022 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACACGC AAACTTGGCA GGAACAGGGG CTCGAAACCC GGTCTCCGGG ACGCACGCGC 
GGTGAAATCA GCCAGGATGA ACTGGCGCAC CAGTGGAGCC GTGTTCGCGG CCGACTTCAG
GAAGAAATCG GCGAGGTCGA GTACCGCAAC TGGTTGCGGC AAGCCGTGCT GCATGGGCTC
GACGGCGATG AAGTGACTGT CATGCTGCCG ACCCGCTTCC TGCGTGACTG GGTGAACAAG
GAATATGGCA ACCTGCTGAC CGCGTTCTGG CAGGCCGAGA ACCCGGCGGT ACGGCGCGTG
GATATCCGGA CCCGGCCGGC CGGCACCAGC GAGCGCGCGC CCGACCTCGC CGAGGTGGAG
CCGAAGACCG CGATCGCGCG GCCCGCCGCC GCGGCGCGCC GCGAGGCCGA GGAACGCCCG
GACATGAGCG CGCCGCTCGA CCCGCGCTTC ACCTTTGATA CATTCGTGGT CGGCAAGCCG
AACGAATTCG CCTATGCCTG CGCGCGCCGC GTCGCCGACG GGCACGCGTC GCCGGGGTTC
AATCCGCTGT TCCTCTACGG CGGTGTCGGT CTCGGCAAGA CCCATCTGAT GCACGCGATT
GCCTGGGAAC TGTCGCAGCG CTCGGACGAG GTCACGGTCG CCTACATGTC GGCCGAGAAG
TTCATGCACA AATTCGTCAG CGCCCTGCGC CGGCAATCGA CCATCGAATT CAAGAACGAG
TTGCGCAGCG TCGATGTGCT GATGGTGGAC GACCTGCAGT TCCTGATCGG CAAGGATGGC
ACGCAGGAGG AATTCTTCCA CACCTTCAAT GCGCTGGTCG ATTCCGGCAA GCAGATCATC
GTCTCGGCCG ACAAGTCGCC GTCGGACCTG TCCGGCATCG AGGATCGGCT GCGCACGCGG
CTCGGCTGCG GCATGGTCGC CGATGTCCAT GCCACGACCT ATGAGCTGCG CCTCGCGATC
CTGGAGGCCA AGGCCGCGCG GGCTGGCGTC GTCGTGCCGG GGCGGGTGAT GGAGTTCCTC
GCGCAGAAGA TCACCGCCAA TGTCCGCGAG CTCGAAGGGG CGCTGAACCG GCTGATCGCC
CATGCCAACC TGTTCGAGCG CCCGGTGACC CTCGAGACGG CGCATGAGGT GCTGCACGAC
CTGCTCCGCG CCTATGACCG CAAGATCACG ATCGAGGAGA TCCAGAAGCA GGTCGCCGAG
CATTACAATA TCCGGGTCAG CGAGATGTCC TCCGCCCGGC GCGCGCGCAA CATCGCCCGG
CCTCGGCAGA TCGCCATGTA TCTCGCCAAG CAGCTGACCA GCCGCAGCCT GCCCGAGATC
GGCCGGAAAT TCGGCAACCG CGACCATACC ACCGTCATGC ACGCGGTCTC CAAGGTGACC
GAACTGATCG AGGCCGATCC CGATTTCGCC GAGGATGTCG AACTGCTGCG CCGGATCCTG
ACCGTCTGA
 
Protein sequence
MDTQTWQEQG LETRSPGRTR GEISQDELAH QWSRVRGRLQ EEIGEVEYRN WLRQAVLHGL 
DGDEVTVMLP TRFLRDWVNK EYGNLLTAFW QAENPAVRRV DIRTRPAGTS ERAPDLAEVE
PKTAIARPAA AARREAEERP DMSAPLDPRF TFDTFVVGKP NEFAYACARR VADGHASPGF
NPLFLYGGVG LGKTHLMHAI AWELSQRSDE VTVAYMSAEK FMHKFVSALR RQSTIEFKNE
LRSVDVLMVD DLQFLIGKDG TQEEFFHTFN ALVDSGKQII VSADKSPSDL SGIEDRLRTR
LGCGMVADVH ATTYELRLAI LEAKAARAGV VVPGRVMEFL AQKITANVRE LEGALNRLIA
HANLFERPVT LETAHEVLHD LLRAYDRKIT IEEIQKQVAE HYNIRVSEMS SARRARNIAR
PRQIAMYLAK QLTSRSLPEI GRKFGNRDHT TVMHAVSKVT ELIEADPDFA EDVELLRRIL
TV